Ligilactobacillus animalis: FAX13_08060
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Entry
FAX13_08060 CDS
T06852
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lani
Ligilactobacillus animalis
Pathway
lani03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lani00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FAX13_08060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lani03400
]
FAX13_08060
Enzymes [BR:
lani01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FAX13_08060
DNA repair and recombination proteins [BR:
lani03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FAX13_08060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
Viral_helicase1
UvrD_C_2
AAA_14
AAA_11
PIF1
TPR_19
TPR_16
AAA_24
TPR_2
Motif
Other DBs
NCBI-ProteinID:
QCQ04560
LinkDB
All DBs
Position
complement(1706987..1709182)
Genome browser
AA seq
731 aa
AA seq
DB search
MLEKTIKKTYQEACEAMRQKQYQKARFYFDEVRHSAPTYRSVNYFLAKCAFVLNEAEENI
YPLVKAHLATETTKNREAAYQLALKTAVKFKNETQLAEFLEQAKIDAVPKLEPFAETLAK
WTGKAPTHMRFKFIQFAKNKTPIATTSHPKYRAYKFFINGMSELQKQRFATGKWQELAVT
KPKFLEFKGYMSCSIRDERTYYRKYLPKFPDLFLRSVFNDHLEEDEFFKSKWERSRVFSL
LQIPAFDRPKITELLELNDLLDETANRHLKGCDDLVYLKQVGEVLPESQAADLSELKLLK
EFGYLCKKNCGHTLHLADKCQYERNFSQLLGQISRRKLPLVHPPKTYRPTKEQFDFLKWL
AQNKHVIINLLGVGGSGKTYTLGQILDPKKTLALAPTHKARLNLAQHGFFNNDTLQHVIY
EIENGNEELVNDYEVIIIDEVSMAPLELLAKLTQTFSTKVRYLLVGDEQQLPPVSQDEDA
LSVCGDPMALIKAKGACFYFRANLRCKDKATGELIAACRAGDVRYLARSQAFKTATGKEM
VLAKYQHEALEECMILAYRNKTVGLINQQFYRILSKDKQKVVPFYFQNGLGRGGFFIGAK
VVFYHNDDSFQNYGYTNSEFGEVIGLELKNDDEDSTVTVQTEVGKYKLPLYRAKKDLLLA
YALTIHKAQGSGAKRVYVLEPEDHGLAYTAVSRAKQELFFVGVTRTQLLEGVQTETPKKK
NLLDFMDDKNK
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagaaaacaataaaaaaaacataccaagaagcctgtgaggcaatgcgccaaaag
cagtatcaaaaggcgcgcttttattttgatgaggtccggcacagcgcaccgacatatcgt
tcggtcaattactttttagctaaatgtgcatttgtgctcaatgaagctgaggaaaatatt
tatcccttagtcaaagcccatttagccacggagacaactaaaaatcgtgaggcagcttat
cagttagcattaaaaacagcagtcaagttcaaaaatgagacccaattagctgaattttta
gaacaagctaaaatcgacgcggtccccaagctggagccttttgctgaaactttggctaag
tggaccggtaaagcaccaacgcatatgcgctttaaatttattcagtttgctaaaaataag
actccgatcgctacaacttcccatcccaaatatcgggcgtataaattttttatcaacggg
atgagtgagctccaaaaacaacgctttgctactggaaaatggcaagaattagcggtcacg
aaacctaaatttctagaattcaaaggctacatgtcgtgttcgatccgggatgaacggacg
tattatcgtaaatatttaccgaagtttcctgatctttttttgcgttcggtcttcaacgat
catctagaagaagacgagttcttcaagtcaaaatgggaacgatcccgcgttttttcgctc
ttgcagatcccagcttttgaccggccgaagatcactgaattgctggagttaaatgacctt
ttggacgaaacagctaacaggcatttaaaagggtgtgatgatcttgtttatttaaagcaa
gtaggtgaagtattgccggaaagtcaggcagctgacctctcagagttaaaattgctcaag
gaatttggctatttatgtaagaaaaattgtggtcatacgctacatttagcggataaatgc
caatatgaacgtaattttagtcagttattgggccagatctcacggcgtaaattgcccttg
gtccatccacccaaaacttatcgtccgactaaagagcaatttgatttcttaaaatggctc
gctcaaaataagcacgtcatcatcaatttactaggtgtcggaggttcgggcaaaacttat
actttgggccagatccttgatcctaaaaagactttagccttagccccaacgcataaggca
cggctaaacttagcacaacacggcttctttaacaatgatactttgcaacatgtgatctat
gagatcgaaaatggcaatgaagagctggtgaatgattatgaagtgatcattatcgatgag
gtatcgatggcgcccctagaactactggctaaattgacccaaactttcagcacgaaagtc
aggtatcttttggtcggagatgagcagcagttaccgccagtctcacaagacgaagatgcc
ttgagtgtttgtggtgatcccatggccttgataaaagctaagggagcatgtttttatttt
agagccaatctgcgctgtaaagacaaagccacgggtgagttgatcgctgcttgtcgggct
ggcgatgtcagatatttagctcgcagtcaggcatttaagacagccaccggtaaagaaatg
gtcttggcgaaatatcaacacgaagctttggaagagtgtatgatcttggcttatcgcaat
aagactgttggtttgatcaatcagcaattttatcgcattttatcaaaggataagcaaaaa
gttgtgccgttttactttcaaaatggattgggtcgaggtggcttttttatcggagcaaaa
gtcgtcttctatcataatgatgatagttttcaaaattatggctatacgaatagtgaattt
ggcgaggtcataggacttgagctcaaaaatgatgatgaagatagcacggtaacggtccaa
actgaagtcggaaagtataaattgcctctgtatcgggctaaaaaagatcttctcttagcc
tatgccttgacgatccacaaagctcaaggtagtggagctaaacgggtctatgtcttagaa
ccagaagatcatggtctggcgtatacggcggtctcgcgtgccaagcaggaattgtttttt
gttggagtcacacgcacgcaactcttggaaggggtgcagacagagaccccgaaaaagaaa
aacttgctagattttatggatgataaaaataaatag
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