Ligilactobacillus animalis: FAX13_09775
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Entry
FAX13_09775 CDS
T06852
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
lani
Ligilactobacillus animalis
Pathway
lani03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lani00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FAX13_09775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lani03400
]
FAX13_09775
DNA repair and recombination proteins [BR:
lani03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FAX13_09775
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FAX13_09775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
SMC_N
nSTAND1
DnaJ_CXXCXGXG
AAA_15
AAA_21
AAA_29
RsgA_GTPase
AAA_16
AAA_33
DUF463
nSTAND3
cobW
TMEM106_N
DUF4350
Motif
Other DBs
NCBI-ProteinID:
QCQ04887
LinkDB
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Position
complement(2060317..2062833)
Genome browser
AA seq
838 aa
AA seq
DB search
MEKIEKLPQQIEVRGGKVHNLKNIDIDIPLHQFVAISGLSGSGKSSLAMGILYEEGSRRY
LEALSTYTRRRLKTGNKANVESVKHIPSALALRQRPAIPSERATVGTMSELLNVIRLVFS
RLGRPVCPNGHAFGPDLKVAQAMSKPGEEMGLLTCPTCGVEFYAYGAEDFAFNSTGACET
CQGTGNVRQLDESKLIADEELSLADGAVASWRLPGRNFMPSVAEQAGVRINVPFKELTAK
EKDFVLNGPQKKFKMDFRTSTGRVFHDFNVLYENAHQAVLESAKTSKSERAQKKISEFFH
YSTCPTCHGTRLKPDLLRQKAGGLNIAEVTELSLHALSEWKMQVLKTLPTEMDTMAQAIF
AEFDDDLKPLLELGLDYLTLARNGNTLSTGELQRIQLARTLRTETTGVLYVLDEPSIGLH
PDNINGLLNVFKQLVAQGNSLVVVDHNVDIVKAADHIIEIGPGSGDNGGQIIATGTPAQL
AKNKNSLIGPYLNGTAELIARPIQPVDTAKITIAVSEHYNLHDVKVDLPLNRLTAVTGFS
GAGKTSLILDSLVPAIKAKAKGEGLPAQVTELDSPIKDVVSVDTSPIGKTTRSTTATYTS
IMDNLRKLFAKQPLAKERHYTPSYFSYNNKQGGCPECGGTGVVTLDVQYLPDMEQTCPMC
AGKRFRPEIQAVKWKGYSIVDILDMDVDQALSVFKAEPKILRELELLKEVGLSYLHLGES
TPSLSGGEAQRLKLVKHLDHKQETTLFVFDEPTIGLHPLDVKVLLQVMQKLIDQGATIIT
ITHDLNLIVNADYILDLGPRGGKHGGKVVFSGTVSELLAHPTSLTAKALAKYWQRFER
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatagaaaaactgccccaacagatcgaagtccgtgggggcaaagtgcataat
ttaaaaaatatcgatattgatattccattacatcaatttgtggcgatctcgggtctttcg
ggttcgggaaagagttcacttgcgatggggatcttatatgaagaaggttcacggcgctat
ttagaagccctttcgacctatactagaagacgactcaagaccggaaataaagctaacgtc
gaaagtgtcaaacatattccatcagcattagccttacgccaacgtcccgcgatcccatct
gaacgggcaacagtagggacgatgagtgaattgctaaatgtgatccgcttagtcttttcg
cgcttaggccgacctgtttgtcctaatgggcacgcgtttggtccagatctgaaagttgcg
caagcgatgagcaagcccggtgaagagatggggttactgacatgtcctacttgtggagtg
gagttttatgcctatggtgcagaagattttgcttttaattcgactggggcatgtgaaact
tgtcaggggacaggaaatgtgcgccagttagatgaaagtaagttgatcgccgatgaagag
ttatcgttggcagatggagcagttgcttcttggcgcttaccggggcgtaacttcatgcct
agtgtggctgaacaagctggagtccggatcaatgtgccttttaaagaattgacagccaaa
gaaaaagattttgtgttaaatggaccccaaaagaagttcaagatggattttcgcacaagt
actggccgggtctttcatgatttcaatgttttgtatgaaaatgcccatcaggctgtttta
gaatcggcgaagaccagtaaaagtgagcgggcgcaaaaaaagatcagtgaatttttccat
tattcgacttgtcctacctgtcatggaacgcgactcaagccagacttgttgcgccaaaaa
gcaggcggattaaatattgctgaagttaccgaacttagcttacatgctttgtcggaatgg
aaaatgcaggtcttaaaaacattgccaactgagatggatactatggcacaggcgatcttt
gctgaatttgatgatgatctcaagcctttattagaactaggcttggattatttgacgtta
gctcgcaatggtaacacgctttcgacaggtgagttgcaacggatccagttggctaggact
cttcgcacagaaacgacgggtgtcttatatgttttagatgaaccgtcgatcgggttacat
cctgataatataaatggtttgttgaatgtctttaaacaattagtcgctcaaggcaattcg
ctggttgttgtcgatcacaatgttgatatcgttaaggcagctgaccatatcattgagatc
gggcctggttcaggggataatgggggccagatcattgccactgggactccagcgcaatta
gctaaaaataaaaattcgttgatcggaccgtatttgaatgggaccgctgagttgatagct
cgtccgatccagccagtggatacagctaaaattacgatcgctgtgagcgagcactataat
ttacatgatgttaaagttgatctgccacttaatcgtttgaccgctgtcacaggcttttcc
ggagcggggaagaccagtttgatcttagactccttagtgccagcgatcaaggccaaagct
aagggagaaggcttaccagcgcaagtgaccgagcttgattcaccgataaaagatgttgtc
agcgtcgatacaagtccgatcggtaagactacccgttcgacgacagcgacctatacgagc
atcatggacaatttgcggaagttgtttgctaaacaaccactggctaaagagcgtcactat
acaccgagttatttttcctataacaataagcaaggtggttgccctgagtgtggtggaact
ggggtcgtgaccttagatgtccaatatttacctgatatggaacagacatgcccaatgtgt
gctggaaaacgtttccgccctgagatccaagcggtcaaatggaagggttattcgatcgtg
gatattttagatatggatgttgatcaagctttgagcgtatttaaagctgagcctaagatc
ttacgggaattagagttattgaaagaagttgggctgagttatctgcatttaggtgaaagt
acgccgagcctttctggtggtgaagcgcaacgcttgaaattggtaaagcacttggatcat
aagcaagaaacaacgctctttgtctttgatgagccgacgatcgggttgcacccattagat
gtgaaagtcttgcttcaagtcatgcaaaaactcatcgatcaaggtgcgacgatcattacg
atcacgcatgatctgaatttgatcgtcaatgctgactacatcttagaccttggaccacgt
ggcggaaaacatggcgggaaggtcgttttcagcggtacagtatcagaattattggcccac
ccgacaagtttgaccgctaaagccctagcgaagtattggcaacgattcgaacgataa
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