Legionella antarctica: TUM19329_08480
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Entry
TUM19329_08480 CDS
T07713
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
lant
Legionella antarctica
Pathway
lant03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lant00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TUM19329_08480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lant03019
]
TUM19329_08480
Enzymes [BR:
lant01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TUM19329_08480
Messenger RNA biogenesis [BR:
lant03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TUM19329_08480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
AAA_11
ERCC3_RAD25_C
Cas3-like_C_2
AppA_4HB
Motif
Other DBs
NCBI-ProteinID:
BCA94487
UniProt:
A0A6F8T2U0
LinkDB
All DBs
Position
complement(874097..875353)
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AA seq
418 aa
AA seq
DB search
MNFTSLGLIEPLLRAVSELGYTEPSPIQVQAIPAVLRGSDVLASAQTGTGKTASFVLPIL
QKIHDKPRAKSNRARVLVVTPTRELAAQVHESIVQYGRHLSLRSAVVFGGVKISPQMMKL
RGGVEILVATPGRLLDLHQQRAILLDEIDTLVLDEADRMLDMGFIHDIKRIIKLVPKNRQ
NLMFSATFSEEIRALVKGILNQPVEIDVAPRNTTAVAVKQTVHPVDKARKSALLSHLIHK
NKWGQTLVFSRTKHGANKLVKQLAEEHIYAAAIHGNKSQSQRTKALADFKSGELHILVAT
DIAARGIDIDQLPCVVNFDLPQVAEDYVHRIGRTGRAGASGQAISLVSADEVGQLQAIEK
LIKRKLERIEIEDFEPNHNLPSSALPSQPKKNFPFKKKATPAARKTERKPFMNRAGKK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaattttacatctttgggtctaatagaacccttacttcgggctgttagtgaattggga
tatacagaaccctctcccattcaagtacaagcaatacctgccgtgttacgtggtagtgat
gtattagcctctgcacaaaccggaactggtaaaactgccagctttgtattaccgattcta
caaaaaatccatgataaaccacgcgctaaaagtaatcgtgcgcgagttttagtcgtcacc
ccaacccgcgagttagctgctcaagtgcacgaaagtattgttcaatatggacgtcattta
tccttacgttctgcggttgtttttggcggagtaaaaattagcccgcaaatgatgaagttg
cgtggtggtgtagagatactggttgcgactcccgggcggttgttggatttgcatcaacaa
cgtgccattcttcttgatgaaatagatacattggtcttagatgaagcagatcgtatgtta
gatatgggcttcattcacgatattaaacgtatcattaaattagtgcccaaaaacagacaa
aatttaatgttctcagctactttttctgaagaaattcgcgccttagtcaaaggtatattg
aatcagccagtcgaaatagatgttgcaccccgcaatacgactgcagtggctgtaaaacaa
accgttcatcccgttgataaagctcgcaaatcggcgttactcagtcatttaatccataaa
aataaatggggccaaaccctggtattttcgcgtaccaaacatggagccaataaattagtt
aaacagctggcagaagagcatatttatgctgctgctattcatggcaataaatcacaatct
caacgcactaaagcgttagctgatttcaaatcaggcgaattacacattttagtggctacc
gacattgccgctaggggaattgatatagatcaacttccatgtgtagtaaattttgattta
ccccaagttgctgaagactatgttcatcgcattggtcgaacaggccgcgcaggagcttct
ggccaagctatttctttggttagtgctgatgaagtcggacaattacaagccatcgaaaaa
ttaattaagcgtaaattggaacggatagaaattgaagattttgaacccaatcacaacttg
cctagttccgcattaccttcacaacccaagaagaatttcccctttaagaagaaagcgact
ccagcagcaagaaaaacagagcggaaaccgtttatgaaccgagcaggtaaaaaatag
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