Legionella antarctica: TUM19329_19530
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Entry
TUM19329_19530 CDS
T07713
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lant
Legionella antarctica
Brite
KEGG Orthology (KO) [BR:
lant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lant03009
]
TUM19329_19530 (rlmD)
Enzymes [BR:
lant01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
TUM19329_19530 (rlmD)
Ribosome biogenesis [BR:
lant03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
TUM19329_19530 (rlmD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
TRM5-TYW2_MTfase
Methyltransf_11
TRAM
PCMT
Cons_hypoth95
Methyltransf_15
UPF0020
Methyltransf_23
Methyltr_RsmB-F
DOT1
RrnaAD
DREV
Methyltransf_4
Methyltransf_ANTKMT
Ubie_methyltran
PabTrmU54_TRAM_dom
Methyltransf_12
FtsJ
PrmA
CMAS
Sortase
Motif
Other DBs
NCBI-ProteinID:
BCA95592
UniProt:
A0A6F8T6D4
LinkDB
All DBs
Position
2029530..2030864
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AA seq
444 aa
AA seq
DB search
MKRIKSRPDPTPQKAQIANLSHDGKGVARINGKATFIQGALTDETVEFQYTRVKKDFDEG
RLLSVIEHSPLRVEPKCPHYQMCGGCSLQHMSEQEQIYFKQKQLLDLLSRFGHTKPQMIL
PPLTGAYWNYRNKARLSVRFVEKKQSAMVGFRERNNPRYITEITQCPVLNAKIDADIIPL
RHLIDSMKDKHCIAQIEVAAGDDDIGLIFRNLKSLADEDEIKIEQFAKQYRYKIFLQPGG
PESVYCFYPPNSSEYLAYNLPDYKINFQFHPTDFTQVNAELNRSMVKLALQLMDLKNTDM
VLDLFCGLGNFSLPMAQFCSKVVGVEGSKTMVERAYMNAKANHLSNVDFYAANLDDITEI
KNLVRQSFNKVLIDPPRSGALEIVKQIDSLNPERIVYVSCNPVTLARDTDILVNQKGYIL
MKAGVMDMFPHTAHVESIALFEKG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaattaaatccagaccagatcctacccctcaaaaagcccaaattgctaattta
agtcatgatggtaagggcgtggcgcgcatcaacgggaaagcaacctttattcagggggcc
ttaactgatgaaaccgttgagtttcaatatactcgggtcaaaaaagactttgatgaaggg
cgattattatctgttattgagcactcaccattgcgggtggagccaaaatgccctcactat
cagatgtgtggagggtgctctctacagcatatgagtgaacaagagcaaatttatttcaaa
caaaagcagcttttagatttgttatcacgatttggccatactaaaccgcagatgatttta
ccgcctttaaccggtgcgtattggaactataggaataaagctcgcttaagtgttcgcttt
gttgaaaaaaaacaatcggctatggttgggtttcgcgaacgaaataatcctcgatatatt
actgagataactcaatgtcctgttttaaatgccaaaattgatgcagatataatccctcta
agacatttaatagactcgatgaaagataagcattgtattgcgcagatagaagttgctgcg
ggtgatgacgatatcggacttatcttccgtaatttaaaatcgttagctgatgaagatgaa
atcaaaattgagcagtttgccaaacaatatcgatataagatattccttcaaccaggtggt
ccagagagtgtttattgtttttatcctccaaactccagtgagtatttagcttataatttg
cctgattataaaattaactttcaatttcatccaactgactttactcaggtaaatgcagag
cttaatcgctcaatggtaaaactggcactacagctgatggacttaaaaaatacagatatg
gtgctagacttattttgtgggttaggcaatttttcacttcctatggctcaattttgttct
aaagtagttggtgttgagggcagtaaaaccatggttgaaagagcttacatgaatgcaaaa
gcaaatcatctgtccaatgtagatttttatgctgctaatttagatgatataacggaaatt
aaaaatctcgttcgacaatcatttaacaaagtactgattgaccccccgagatcaggcgct
ctggaaattgtgaaacagattgattcacttaacccggaacggattgtatatgtatcgtgt
aacccagtaacattagcacgagatacagatatattagtaaatcaaaaaggttatattttg
atgaaagcaggggtaatggatatgttcccccatacggcacatgttgaatctatagccttg
tttgaaaaaggataa
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