Lentibacillus amyloliquefaciens: AOX59_04785
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Entry
AOX59_04785 CDS
T04204
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lao
Lentibacillus amyloliquefaciens
Pathway
lao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AOX59_04785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lao03019
]
AOX59_04785
03400 DNA repair and recombination proteins [BR:
lao03400
]
AOX59_04785
Enzymes [BR:
lao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AOX59_04785
Messenger RNA biogenesis [BR:
lao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AOX59_04785
DNA repair and recombination proteins [BR:
lao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AOX59_04785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
ALX47980
UniProt:
A0A0U4E3X7
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All DBs
Position
complement(964103..965647)
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AA seq
514 aa
AA seq
DB search
MIKENLKKQLKQQFYIDSFREGQKEIIEDVIEGHDVLGILPTGSGKSLCYQLPATILNGL
TIVVSPLISLMEDQVKQLKAAGFKDVVALNSFMRPDEKTDVFNRLDQFKLIYLSPELLQQ
NEVIGQLKNVRISLFVIDEAHCISQWGHEFRPDYLRLGTVLKKLNNPPLLALSATATKEV
QHDIISSLEKPDIISHIYPMDRDNITFMVEKVNNDNEKRNFMMDILRKNRVPTLIYFSSK
RKAEEIAAYISGQLSFQRVAFYHGDMEQIDRIIIQQQFMNGQLDIICCTSAFGMGINKRD
IRLILHYHFPLQIESFLQETGRAGRDGKSSVSMLLYSPGDEHIQGSIIQNELPAKDNLTG
LFNKLYDMYSKDMQLPSSSRIFETLELNEVQCRFLYYQMEKHGMMDGKALIYDSNNWKDS
IRKIGHFIEKRTSFKERKLYEMLNWIHEENCLRKHLYKGFQDNYKPPLYGCCSNCGFTFE
KWEPEQTETDEVVLYWEAKLKKLLLIEDYNNETK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
ttgattaaagaaaacttaaaaaaacaattgaaacagcaattttatattgattccttccgg
gaaggtcagaaagaaattatagaagatgttatagagggacacgatgtattgggtatattg
ccgactggttcggggaaatcattgtgctatcagttgcctgcaacgatccttaatggtctc
actattgtcgtttccccgttaatctctttaatggaggaccaggttaaacagctgaaagca
gcaggatttaaagatgttgtggcattaaacagttttatgagaccagatgagaagaccgac
gttttcaatcgattggatcagtttaaattaatttatctgtccccggaacttcttcaacaa
aatgaagtgattgggcagctgaaaaacgtcaggatttcattattcgtcatagatgaagca
cattgcatttcacagtgggggcatgaattcagaccggactatttaagacttggcactgta
ttgaaaaaactgaacaacccccctttattggcactcagtgcgacagcaaccaaggaagta
cagcatgatatcataagttcattggaaaagcctgatattatcagtcatatttatccgatg
gacagggataatataacgtttatggtggaaaaggttaataatgacaatgagaaaagaaac
ttcatgatggacatcttaaggaaaaacagagttccaacactcatttatttttccagtaag
cgaaaagcagaagaaattgctgcatacatatcaggacaactttctttccagcgagtggca
ttctatcatggggatatggagcagatagacaggattataattcagcagcaattcatgaat
ggacaacttgacatcatctgttgtacaagcgcgtttggaatggggatcaataagcgggat
atacggctgattctgcactaccactttccattgcaaattgagtcttttctccaggagaca
ggaagagcgggccgcgacggcaaatccagtgtcagtatgctattatactccccgggagac
gaacacatccaagggtcgatcattcaaaatgaactcccggcaaaagacaacttaacaggc
ttgtttaacaagctttatgatatgtattcgaaagatatgcaattgccgtcatcttcccgc
atctttgaaacgttagaactgaatgaagtccaatgccgatttttgtattatcaaatggag
aagcatggtatgatggatggaaaagccctcatttatgatagcaataactggaaagattcc
attcgcaaaatcggtcattttattgaaaaaagaacgtcctttaaagaaagaaaactttac
gaaatgttaaattggatccatgaagagaactgcttgcgaaagcatctttataaaggattt
caggacaattacaagccgccgctgtatggttgctgcagcaattgcgggtttacttttgaa
aaatgggagccggaacaaacagaaaccgatgaagttgtgctctactgggaagccaaactt
aaaaagttattgcttattgaggattataataatgaaacaaagtga
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