Lentibacillus amyloliquefaciens: AOX59_05910
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Entry
AOX59_05910 CDS
T04204
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lao
Lentibacillus amyloliquefaciens
Pathway
lao03410
Base excision repair
lao03430
Mismatch repair
lao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AOX59_05910
03430 Mismatch repair
AOX59_05910
03440 Homologous recombination
AOX59_05910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lao03400
]
AOX59_05910
DNA repair and recombination proteins [BR:
lao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AOX59_05910
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AOX59_05910
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AOX59_05910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
DSPc
ADH_zinc_N
Tox-PL-2
Motif
Other DBs
NCBI-ProteinID:
ALX48180
UniProt:
A0A0U4FK95
LinkDB
All DBs
Position
complement(1182683..1185010)
Genome browser
AA seq
775 aa
AA seq
DB search
MLKSKMKWKFPKEQNDLSNLNSNKFSPLIKELLLQRGITSDEEAEEFLSPDLNNLHSVNL
LADIEKATERVHKAISANEKILVYGDYDADGVSSTAIMIKALQELGANCDYYIPNRFTEG
YGPNEEAFRAAHAHGCQLIITVDTGIASTHEAAVAKQLGMDLIITDHHEPQEQLPDAFAI
IHPKCSPDYTFKELAGAGVAFKFAQSLLGYFPKQYLDYLVIGTIADLVPLIDENRILAFY
GLKALSVSDKPGLVAIKKVCGISGDVNEEAIGFSIGPRLNAVGRLQDADLAVQLLLTDDQ
DEADKIADQVQSINQKRQKIVSDIVKEAEEMVASRDGQGVIIAAKEGWNQGVLGIVASNL
VRKYDRPAIVLSILPEEGIAKGSARSIPAFDLFSGCMEIRDVFTQFGGHAQAAGMTLPLD
NLEQLKTELNDIIHQQLRNEDFTQEVEVTKTIAMPEINEALVEEVGQLAPFGMANPKPVF
HIKEIPNDARKIGANKNHLKMQFKEQNKTMDGIGFGFGDLYDHLSPKTEVSIVGELNINE
WNGFRKVQMVMQDMKIDEKQLFDHRGAKQFDLTHYVSTNGDHAAVTQTLSSNNTYFDNVH
PVAYDTDIRHLKNVHNLFLYDLPQDLKTLQSLIQQLNPLNIHVCFHLNDSVFMKPFPSRE
DFKWLYALLAKRQQIDINKEAAMITEAKAWTHDKLIFMANVFFDLDFVKIENGVIQLSNN
PAKKDLTESEVYQERLNRAEIEKTLYYSTYDELKSWLLECMNDRHTLEEELVYGL
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagagtaaaatgaaatggaaatttccaaaagaacaaaacgatttatcaaatttg
aattccaataaattctcaccgctaattaaagaattgttattacagcggggaatcacatca
gatgaagaagctgaggagtttttatctcctgatctgaataatttacacagtgtcaattta
ttagcggatattgaaaaagcgacagagcgcgtacataaagcaatcagtgcaaatgaaaaa
attcttgtctatggcgattatgatgctgatggggttagctccaccgctatcatgattaaa
gcactgcaggaacttggcgcaaattgtgactattatataccgaatcgctttacagaagga
tatggaccaaatgaggaagcattcagagcggctcatgcacatggctgccaattaattata
acagtcgatacaggaatagcttctacacatgaagcggctgttgctaaacaattaggaatg
gatctgattatcaccgatcatcacgagccacaagagcaattgccggatgcttttgcgatt
atacatccaaaatgttctcctgactacacatttaaagaacttgcaggtgcgggcgttgca
ttcaagtttgcacaaagtcttctgggctattttccaaagcaataccttgactacttagtg
attggcacaatagctgatcttgtcccattaatcgatgaaaatcgcatcctggctttttat
ggattaaaggctttatcagtaagtgacaaacctggacttgtcgctataaagaaagtttgc
ggtatcagtggggatgttaatgaagaagctatcggcttttcaatcgggcccagattgaat
gcggtcggcagattacaggatgctgaccttgcagttcaattattgctgacagatgatcag
gatgaagctgacaaaatagctgaccaggtccaatcgatcaaccaaaaacgccaaaaaatt
gtcagtgatattgtaaaagaagctgaggaaatggtggcttctcgagatggacaaggggtt
attattgctgcgaaagaaggctggaatcagggtgtgcttgggatagtggcttcaaatctt
gtgcggaaatacgaccgcccggcaatcgttctatccattttaccggaagaaggcatcgca
aaaggctctgccagaagtattccggcttttgatttgttctcaggctgcatggaaatcaga
gatgttttcacgcaatttggcggtcacgcccaggcagccggcatgacacttccgctggat
aatctggagcagttaaaaactgagcttaacgatatcattcatcagcaacttcgaaacgaa
gatttcacacaagaggttgaagtgactaaaacgatagccatgcctgagattaatgaggca
ttggttgaagaggtcggtcagctggcaccttttggcatggccaatccaaagccggttttt
cacataaaggaaattcccaacgatgccagaaaaattggagccaataagaatcatttaaag
atgcaatttaaagaacagaataaaacaatggacggaatcggtttcggttttggagattta
tatgaccatctctcgccaaaaacagaggtgtcgattgtcggtgagcttaacatcaatgaa
tggaatggttttcggaaagtccaaatggttatgcaggatatgaaaattgatgaaaaacaa
ttattcgatcatcgcggcgcaaaacaattcgatttgacgcattatgtttccactaatggg
gatcatgcagcagttacgcaaacattatcgtccaataatacgtactttgataatgttcac
cctgttgcatatgataccgatataaggcacttgaaaaatgtccacaatctatttttgtat
gatttgccacaagacttgaagacattgcaatcattgattcagcagttaaatccgcttaat
attcatgtatgttttcacctgaacgatagtgtgtttatgaaaccatttccttcaagagag
gattttaaatggctctacgcccttctggccaagcgacaacagattgatatcaataaagaa
gcagctatgatcacagaagctaaagcatggacacatgacaagttaatatttatggcaaac
gtgttttttgatcttgattttgttaaaatagaaaatggtgttatacaattgagcaacaat
cctgctaaaaaagatttaacggaatcagaggtataccaggaacgcttaaatagagctgaa
attgaaaaaacattatactattcaacatatgatgaattgaaatcatggttattggaatgt
atgaatgacaggcatacgcttgaggaggaacttgtttatggattataa
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