Lentibacillus amyloliquefaciens: AOX59_06755
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Entry
AOX59_06755 CDS
T04204
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lao
Lentibacillus amyloliquefaciens
Pathway
lao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AOX59_06755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lao03400
]
AOX59_06755
Enzymes [BR:
lao01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AOX59_06755
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AOX59_06755
DNA repair and recombination proteins [BR:
lao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AOX59_06755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ALX48334
UniProt:
A0A0U4FI95
LinkDB
All DBs
Position
complement(1335290..1336120)
Genome browser
AA seq
276 aa
AA seq
DB search
MPELPEVETIKNTLKRFVIDKTITDVSVFWPNIIKQPDDIDHFKHLLTEQSIRDIHRRGK
FLLFELDDAVLVSHLRMEGKYSVHPSAEPLKKHTHVIFKFNNGEELRYNDVRKFGTMHLF
KKGDERNNKPLNQLGPDPFDEAFTLDYFYQKLKKTDRVIKSVLLDQAVVAGLGNIYVDET
LFKAHIHPLKKANKLKKREAKAIWEAAIHTLKEAVAQGGTTIRSYVNSQGDMGMFQQELF
VYGHENEPCKTCGNPVVKMKVGGRGTHVCVSCQKMK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccagaagtcgagacgataaaaaatacactcaaacgatttgtaatcgat
aaaaccattacggatgtatctgtattttggccgaatatcattaaacagcccgatgatatt
gatcattttaaacaccttttaacggaacaatcgattcgggatatacaccggagagggaaa
tttttgttgtttgaactggatgatgctgttttggtatcccatttgcggatggaaggcaag
tacagtgttcatccgtcagcagaaccgttaaaaaaacatacacacgtcatttttaaattt
aataacggggaagaactccgctacaacgatgtgcgcaaattcgggacgatgcatctattt
aaaaaaggagatgaacggaacaataaaccgctgaaccaacttggcccggatccgtttgat
gaagcatttacgctggattatttttaccagaagctaaaaaaaaccgaccgtgtcatcaaa
tcggtattgttggatcaggcggttgttgccggtttgggaaatatttatgttgacgaaaca
ttgtttaaagcacatattcatccgttgaaaaaagcgaataaattgaagaaacgagaagca
aaagcgatttgggaagcagcgatacacaccttgaaagaggcggttgcccagggaggaacc
acgattcggtcgtatgtcaattcccagggcgatatgggaatgtttcagcaggagttgttt
gtttacggccatgaaaacgagccatgcaaaacatgcggcaaccccgttgtgaaaatgaaa
gtcggcggacggggaactcatgtctgtgtttcatgtcaaaaaatgaagtga
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