Lentibacillus amyloliquefaciens: AOX59_08985
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Entry
AOX59_08985 CDS
T04204
Name
(GenBank) RNA polymerase subunit sigma
KO
K03093
RNA polymerase sigma-I factor
Organism
lao
Lentibacillus amyloliquefaciens
Brite
KEGG Orthology (KO) [BR:
lao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lao03021
]
AOX59_08985
Transcription machinery [BR:
lao03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AOX59_08985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
HTH_Tnp_ISL3
HTH_16
HTH_7
HTH_26
Motif
Other DBs
NCBI-ProteinID:
ALX48739
UniProt:
A0A0U4F7H2
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All DBs
Position
complement(1794579..1795310)
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AA seq
243 aa
AA seq
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MFMSNQPLTETPLEDMILSAQEGDQGIQHHLLKSYQPFIAKCVSEVCKRYIDPQTDDEFS
VGLNAFNEAMMSYCPKKGGSFLAFSKLVVKRKVIDYIRYIQKTPATVSLDDNYNEEQMEN
PVEILAVNESYRKEQHALQLREEILDFKEKLDIYRLSLSQLTKVSPKHRDARETAISVAR
MLHNDAEFNSYVKAKKKMPLKDLARQVNVSKKTLERNRKFILAIFIILDGDYTYLKEYLK
GVG
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgtttatgagcaatcagccattaacagaaacaccacttgaagatatgatactttcagct
caggagggggatcaggggattcaacatcatcttctgaaatcctatcagccatttatcgct
aaatgcgtttcagaagtgtgcaagcgttatatcgatccgcaaactgatgatgaattcagc
gttggcttaaatgcttttaatgaggccatgatgtcttattgcccgaaaaaaggcggttct
tttctggctttttctaaacttgtggtgaaacgaaaagtcattgattatatccgttatatc
caaaaaacgccagcaacagtgtccttggatgataactataatgaggaacaaatggagaat
ccggttgaaatattggcggttaatgagtcctatcggaaagaacagcatgctcttcagctc
cgcgaagaaattttagatttcaaagagaagctcgacatctacaggttgtctttaagtcag
ctgacaaaggtttcacccaaacatcgggatgcccgcgaaacagcaatttcagttgcacgg
atgctgcataacgatgcggaattcaattcttatgttaaagctaagaaaaaaatgccgcta
aaagatttggccaggcaggtaaatgtcagtaaaaaaacgctggagcgaaaccgaaagttc
attctcgcaatttttataattctggatggagattatacgtatcttaaggagtatcttaag
ggggtgggttag
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