Lentibacillus amyloliquefaciens: AOX59_11480
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Entry
AOX59_11480 CDS
T04204
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lao
Lentibacillus amyloliquefaciens
Pathway
lao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AOX59_11480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lao03019
]
AOX59_11480
03009 Ribosome biogenesis [BR:
lao03009
]
AOX59_11480
Enzymes [BR:
lao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AOX59_11480
Messenger RNA biogenesis [BR:
lao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AOX59_11480
Ribosome biogenesis [BR:
lao03009
]
Prokaryotic type
rRNA helicases
AOX59_11480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
Stimulus_sens_1
ERCC3_RAD25_C
CobA_CobO_BtuR
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ALX49150
UniProt:
A0A0U4FKG8
LinkDB
All DBs
Position
complement(2301121..2302608)
Genome browser
AA seq
495 aa
AA seq
DB search
MTTFNELNISKPIMDALQKMGFEEATPIQAETIPQALQGNDVIGQAQTGTGKTAAFGIPM
IERIDPKERKIQGLVVAPTRELAIQVAEELNRLGKIKGIRSMSVYGGQHMERQIRALKDG
PHIVVATPGRLLDHMRRKTIRTTEIQTTVLDEADEMLNMGFIDDIRDILKNIPEERQTLL
FSATMPKEIRDIATNLMNNPKEVKVKAKEMTVENIDQYFIEIPEKHKFDTLTNHLDFYAP
ALAIVFSRTKKRVDEITDGLHARGFRAEGIHGDLTQGKRMSVLNKFKNNRVDVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGRTGEAVSFITPREMAHLNLIEKVTK
SKMKRMAPPTHQEAKRGQQQAAADKIREKIDKLDLQDYQETASELLQDYDSMTVVAAALK
MMTKERRNAPVNISSVQPISVKKGQGGGKNNKGRPQNKKFYGKRGQGGRNQGGRNQGGRN
RQGNYQKNRGRKPNN
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtgacaacatttaacgaactaaatatttcaaagcctattatggacgcattgcaaaagatg
ggatttgaagaagcaacgccgattcaggcagaaacgattccgcaggctttacaaggaaat
gacgtaattggacaagctcagacaggaaccggaaagacagcggcattcgggatcccgatg
attgaaagaattgatccgaaagagcggaaaattcaagggttggttgttgcaccaacaagg
gaactcgccatccaggtagctgaggagctgaaccggcttggtaaaataaaaggcatacgc
tccatgtcggtttacggcggacagcatatggaacggcaaatccgtgctttaaaggatggt
ccgcacatcgtcgttgccacaccgggaagactgctcgatcatatgcgccgaaaaacaatc
cggacgacagaaattcagacaactgttctcgatgaagctgatgaaatgctgaacatgggc
ttcattgacgatatccgtgatattttgaaaaacattccggaagaacggcagacattatta
ttttctgcaacgatgccaaaagaaatccgtgatattgcaaccaatctcatgaacaatcct
aaagaagtcaaagtgaaagcaaaggaaatgactgttgaaaatatcgatcagtatttcatt
gaaattcctgagaagcataaattcgatacgttgaccaatcatttggacttttatgcacct
gcacttgcaattgtcttcagccggacgaaaaaacgggtggatgaaatcacggacggtctt
catgcccgcgggttccgtgcagaaggcatccacggagatttgacacagggaaagcggatg
tcggttttaaacaaatttaaaaataatcgtgtcgatgtactggtagcaactgatgtcgcg
gcacggggactggatatttccggtgtaacgcacgtttataactttgatataccgcaggat
cctgaaagctatgtacaccgtatcggccgtaccggaagagcaggacgtaccggggaagcc
gtatcattcatcacaccacgtgaaatggcgcatttaaatttgattgagaaagtaaccaaa
agcaaaatgaaacggatggcaccgccgactcatcaggaagcgaagcgcggtcagcagcag
gctgcagcagataagatccgggaaaagattgacaagcttgatttgcaggattatcaggag
acagccagtgaactgctccaggattacgattcaatgacagttgtggctgctgctcttaaa
atgatgacaaaagaacgtcgcaacgctcccgtcaatatttcatccgttcagccgatcagc
gtgaaaaaaggccagggcggcggcaagaataataaaggcagaccacagaacaagaaattt
tacggtaaacgtggccaaggcggacgcaatcagggtggacgcaaccaaggcgggcgtaac
cgtcaagggaattatcagaaaaaccgcggtcgcaaaccaaataactaa
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