Labrenzia sp. CP4: ACP90_00355
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Entry
ACP90_00355 CDS
T04295
Name
(GenBank) acetoin catabolism regulatory protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
lap
Labrenzia sp. CP4
Brite
KEGG Orthology (KO) [BR:
lap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lap03000
]
ACP90_00355
Transcription factors [BR:
lap03000
]
Prokaryotic type
Helix-turn-helix
Other families
ACP90_00355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
HTH_23
HTH_30
HTH_IclR
HTH_24
HTH_50
HTH_28
HTH_AsnC-type
HTH_3
HTH_38
HTH_1
AAA_16
HTH_Tnp_ISL3
HTH_29
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
AMN55493
LinkDB
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Position
complement(70493..72253)
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AA seq
586 aa
AA seq
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MRDLEHVSEIDRVLKGYETGRDGLVSESWRRCVQTYGMDPARPEPAHIVTEQQLREHQEQ
SERLIATARSGLRTLFKQVAGHNYVLLLADAKGVCVDFFGDPRFEDDLRQAGLYLGSDWS
EDLAGTCGVGSCIVTGEAVTIHQSDHFGLSHTPLSCTAAPIYDTCGKLAAVLDISLLRSP
SPKSSQNLAMNLVKASTRRVEMANLMATTRKEWVLRFSTSPEFLEVDPEAAIALDDSGRI
TGMTHGALACLAPTGSTDLIGSRIDMYLDLDVDDLPSLMRGRPAEDRVLRRRDGGGLYGH
AIAPQAARMARSPVSGTLPTPLRGICGQDATLSQVVSKVARLAPTQVPILLSGETGTGKE
YLARAIHVLGPADRSFHTLCCSALKPEKVGALSDAAAGTLFLRGIEDLDKAGQAALLALL
EHRSDLRVVATTRQDPAGSTSIRALRPELYFRLAGSLIRIPPLRHRQDFDWLVDRLLRRS
PRDLRLSPSARAELSGRHWPGNIRELATLLDVATALAETDVIDLTDLPQASLSRRVETDP
KQDLEALLDACGWNMSQVARRLGVNRSTVLRRMRSLGLEPHPYPRA
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaccttgaacatgtgagtgaaatcgaccgcgtattgaaggggtacgagaccggc
agggatgggctggtgtcggaaagctggcggcgctgtgtccagacgtacggcatggatccg
gcgcgtccggaaccggcacatatcgtcaccgagcagcaactgcgcgaacatcaggagcag
tccgagcggttgatcgcgacggctcgttccggcctgcgcaccctgttcaagcaggtggcc
gggcacaactacgtactgctgctggccgatgccaagggtgtgtgcgtcgacttctttggc
gatcctcggttcgaggacgatctccggcaggcgggcctttatctcgggtccgactggtcc
gaggatcttgcgggaacctgcggtgtcggctcctgcatcgtgacgggggaagccgtcacg
atccaccagagcgatcacttcgggctgtcgcatacaccgctgtcctgtacggcggccccc
atctacgacacctgcggcaagctggcggcggttctggatatttccctcctgcgctcccca
agcccgaaatcgagccagaacctcgcgatgaacctggtgaaggcttccactcgccgggtc
gagatggccaacctgatggcgaccacgcgcaaggaatgggtcttgcgcttctcgacatcg
ccggagtttctggaagtcgatccggaagccgccatcgccctggacgacagcggacggata
acaggaatgacgcacggcgcactcgcctgtctggccccgaccggttccacagacctcata
ggtagccggatcgacatgtacctggacctggatgtcgacgatctgccgtccctgatgcga
ggccgcccggcggaagatcgggttctgcgccggcgcgacggtggtgggttatacggtcat
gccatcgctccgcaagccgctcgcatggcacgcagccccgtttccgggaccttgcccacg
ccgctgcgcggcatctgcgggcaggatgcgacgctgtcgcaggtggtgtcgaaagttgcc
cggcttgcaccaacgcaggttcccatcctgctgtctggcgaaaccggaacgggcaaggaa
tatctggcaagggccatccatgttctgggtccggccgaccggtcgttccatacgctctgc
tgttccgctctgaaaccggaaaaggttggcgccttgtctgacgctgcagccggaacgctg
ttcctgcgcgggatcgaagatcttgataaggcgggccaggctgccttgcttgccttgctg
gaacatcgaagtgaccttcgcgtggtggccaccacgcggcaggatccggcaggttccaca
agcatccgcgcactgcggccggaactctatttcaggcttgccgggtctctcatccggatc
ccgccactccggcaccgccaggatttcgactggctggtcgatcgcctgttgcgacgctct
ccgcgggacctgcgcctgtcaccttcggcacgcgccgaactcagcggccggcattggccg
ggcaacatccgtgaactcgcgaccttgctggatgtcgcgacagcgcttgcagaaaccgat
gtgatcgaccttaccgatctgccgcaggcgtctctgtccagacgcgtcgaaaccgatccg
aaacaggatctggaagcacttctggacgcctgtggctggaacatgtcccaggttgcccga
aggcttggcgtcaatcggtcgacggtgctccggcggatgcgctctctcggcctggagcca
cacccctacccgcgtgcatga
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