Labrenzia sp. CP4: ACP90_01170
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Entry
ACP90_01170 CDS
T04295
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
lap
Labrenzia sp. CP4
Pathway
lap00300
Lysine biosynthesis
lap00470
D-Amino acid metabolism
lap01100
Metabolic pathways
lap01110
Biosynthesis of secondary metabolites
lap01120
Microbial metabolism in diverse environments
lap01230
Biosynthesis of amino acids
Module
lap_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lap00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ACP90_01170
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ACP90_01170
Enzymes [BR:
lap01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
ACP90_01170
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AMN51296
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Position
238902..240176
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AA seq
424 aa
AA seq
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MHHFDYKNGELFAEDVAIETIAREVGTPFYCYSTATLTRHYQVFAAAFSDIPSLVCYAMK
ANSNQAVLKTLAQLGAGMDVVSEGELRRARAAGVPASKIVFSGVGKTEAEQAYALQEDIL
CFNVESEPELRQLSRVATAMGKTARVSMRINPDVDAKTHAKIATGKAENKFGIPWQRARD
VYAEAAALSGIKVTGIDMHIGSQITELEPFDNAFARLGELITDLRSQGHTIDHVDLGGGL
GIPYITDNNPPPHPDAYAQVVKKHVRELDCMVMFEPGRMIAGNAGILVTEVVYVKEGADK
NFVIVDAAMNDLIRPTLYEAYHEVRPVREPGEETDRIKADIVGPVCETGDFLAQNRDMPR
VEAGEMLAVYSAGAYGAVQSCTYNSRLLVPEVLVNADQFAVIRPRTSYEDLLGLDRIPDW
LKGS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
ttgcatcacttcgattacaagaatggcgagctgtttgccgaagacgtggcgatcgagacg
atcgcgcgtgaagtcggcacaccgttctactgctattccacggcaacgctcacccgtcac
taccaggtgtttgccgccgcattcagcgatattccgtcgttggtctgctatgcgatgaag
gcaaattccaaccaggcggtcctgaagacgcttgcacagctgggcgccggcatggacgtg
gtctcggaaggcgaattgcgccgtgcacgggctgcgggcgttcccgcgtcgaagatcgtc
ttttcgggggtcggcaagaccgaggccgaacaagcctacgcgcttcaggaagacatcttg
tgcttcaacgtggaatccgagcccgagttgcgccagctttcacgggtcgccactgcaatg
ggcaagaccgcacgggtgtccatgcgcatcaacccggacgtcgatgccaagacccatgcc
aagattgcgaccggcaaggccgagaacaagtttggcattccctggcagcgtgcacgtgac
gtttatgccgaggcagcggctctgtccggtatcaaggtcaccggcatcgacatgcacatc
ggctcgcagatcacggagctggagcctttcgacaacgcatttgcgcgtctgggcgagctg
atcacggatctgcgctcgcaaggccacacgatcgaccatgtcgatctcggtggtggactg
ggtatcccctatatcaccgacaacaatccgccgccgcatccggacgcttatgcccaggtg
gtcaagaagcatgtgcgcgaactggactgcatggtcatgttcgagccgggccgcatgatt
gccggcaacgccggcatcctggttaccgaagtcgtctatgtgaaggaaggcgccgacaag
aatttcgtcattgtcgatgccgccatgaacgatctgatccgtccgacgctttacgaggcc
tatcacgaggtgcgcccggtgcgcgaaccgggggaagaaacagaccgaatcaaggccgat
atcgtcggtccggtgtgcgaaaccggtgattttctggcccagaaccgggatatgcctagg
gtagaggccggggaaatgctggcggtctactcggccggcgcctatggcgcagtccagtcc
tgcacgtacaattcgcggcttctggtgcccgaagtgctcgtaaatgcagaccaatttgcc
gttatccggccccggaccagctacgaagacctgctcggtctggaccggattccggactgg
ctcaagggttcgtga
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