Labrenzia sp. CP4: ACP90_01625
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Entry
ACP90_01625 CDS
T04295
Name
(GenBank) RNA polymerase sigma 70
KO
K03089
RNA polymerase sigma-32 factor
Organism
lap
Labrenzia sp. CP4
Brite
KEGG Orthology (KO) [BR:
lap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lap03021
]
ACP90_01625
Transcription machinery [BR:
lap03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACP90_01625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
GerE
HTH_3
bHLH-TF_ACT-like_plant
AA_synth
HTH_31
MRP-63
Motif
Other DBs
NCBI-ProteinID:
AMN51358
LinkDB
All DBs
Position
complement(333931..334794)
Genome browser
AA seq
287 aa
AA seq
DB search
MSQSEKRQLVRAAMKAPYLTREEELELAIRWRHNRDEKALEKLSLSHMRLVIAVASRFRN
FGLSLGDLIQEGHVGLLEAAARFEPEREVRFSTYATWWIRASIQDYILRNWSIVRGGTSS
SQKALFFNLRRLRAKLSGNQTPLTDSELHQKIADAIGVKQSDVALMNARLSGPDTSLNAP
VTDSEGSSADRQDFLVSDAPLPDEIVTVNIDAERRRRWLSSALEVLSERELKIVRERRLS
EEGATLESLGVKLGISKERVRQIESRAMEKLKSALLAAQPDRAAYST
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagagcgagaaacgtcaactggtaagggccgcgatgaaagccccctacctcacg
cgcgaagaggaactggagcttgcgatccgctggcgacataaccgggatgagaaagcgctt
gagaaattgtcgctctcgcacatgcgcctggtcattgccgttgcctcacgattccgcaac
ttcggcctgtcgcttggcgatctgatccaggagggccatgtcggtcttctggaggctgcc
gcccggttcgaaccggaacgggaagtgcgcttttccacctatgccacgtggtggatccgc
gcttccatccaggactatatcctgcgcaactggtcgatcgttcgtggtggcacctcttcc
tcccagaaagccctgttcttcaacctccggcgcctgcgtgccaagctctccggcaatcag
actcctctgaccgacagcgagcttcaccagaagatcgccgacgcaatcggcgtcaagcag
tccgacgtcgccctcatgaatgcgcggctgtccggccctgatacctccctgaacgcccct
gtaaccgacagcgaaggctccagcgcggaccgtcaggactttctggtgtccgatgccccg
ttgccagacgagatcgtgaccgtcaacatcgatgccgaacgccgccggcgctggctgtct
tccgccttggaggttctcagcgagcgcgaattgaagatcgtgcgtgaaagacgcctgtcg
gaagagggcgccacgctggaatcgcttggcgtgaaactcggcatttccaaggaacgcgtg
cggcagattgaaagccgggccatggaaaaactgaaatccgccctgttggcagcacagccg
gacagggccgcctacagcacctga
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