Labrenzia sp. CP4: ACP90_02690
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Entry
ACP90_02690 CDS
T04295
Name
(GenBank) TetR family transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
lap
Labrenzia sp. CP4
Brite
KEGG Orthology (KO) [BR:
lap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lap03000
]
ACP90_02690
Transcription factors [BR:
lap03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
ACP90_02690
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
wHTH_Par
HTH_36
Sigma54_CBD
DUF2481
HTH_11
HTH_22
Motif
Other DBs
NCBI-ProteinID:
AMN51527
LinkDB
All DBs
Position
complement(548600..549220)
Genome browser
AA seq
206 aa
AA seq
DB search
MSVSDQKKKQIVEAAIAEFQEKGYAGASMDRISERAQVSKRTVYNHFESKDVLFKEINQC
LADQINSALEVAYDPAAPIRDALVRLGWAEGELMINPCFMSLARMVMSETIRDPALAADM
DSRMTKISVFTEFMDRATREGKLTADDPSLAATQFLGLIKARSFYPNIHSGRVTTRPEME
RIIEESVDMFLARYGAKATAQTVAAQ
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtatcggatcagaaaaagaagcagatcgtcgaggctgcaatcgcggagtttcag
gaaaagggttatgccggagccagcatggaccggatttccgagcgagcccaggtttccaag
cgcacggtctacaatcactttgaaagcaaggacgtgcttttcaaggagatcaaccagtgc
cttgccgatcagatcaactcggcgcttgaagtcgcttacgacccggcggcgcccattcgc
gatgcccttgtgcgtctcggctgggccgaaggcgagctcatgatcaacccttgcttcatg
agcctggcccgcatggtcatgagcgaaacgatccgagacccggcccttgcagccgatatg
gacagccgcatgaccaagatctccgtctttaccgagttcatggatcgcgccacgcgcgaa
ggcaagctcacggccgacgacccatccctggcggccacgcaatttctcggcctgatcaag
gcccgatctttctacccgaacatccacagcggccgcgtgacgacccgccccgagatggaa
cggatcatcgaggaaagcgtcgacatgttcctggcccgatacggcgccaaggcaaccgcg
caaacagtggcggcgcagtaa
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