Labrenzia sp. CP4: ACP90_04835
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Entry
ACP90_04835 CDS
T04295
Name
(GenBank) Holliday junction resolvase
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
lap
Labrenzia sp. CP4
Pathway
lap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACP90_04835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lap03400
]
ACP90_04835
Enzymes [BR:
lap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
ACP90_04835
DNA repair and recombination proteins [BR:
lap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACP90_04835
RecFOR pathway proteins
ACP90_04835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
LytB_SH3
Motif
Other DBs
NCBI-ProteinID:
AMN51860
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All DBs
Position
1019438..1019953
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AA seq
171 aa
AA seq
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MIHAIRLLGIDPGLRRTGWGMIEATGNRLSFIASGTVTSDNKKSLAERLVQLHDGLSEVV
RQHEPSEAAVEHTFVNKDAGATLKLGQARGIALLVPSLAGLPVAEYAPNLVKKTVVGTGH
AEKEQIRAMVKVLMPRATFNSDDAADALAIAICHAQHRSNSTARLAAMGAI
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgatacacgcgattcgtttgctgggcatcgacccggggctgcggcgtaccggctggggc
atgatcgaggcgacgggaaatcgcctgtccttcatcgcttccggaacggtaacctccgac
aacaagaagagcctggccgagcgcctggtgcagctgcatgacggcctcagcgaggtcgtg
cgccagcacgagccatccgaagccgcggttgaacatacgttcgtcaacaaggatgccgga
gcaacactgaagctcgggcaggcacgcgggatcgctctgctggtgccatcgctcgctgga
cttccggttgccgaatatgcgccgaacctcgtcaagaagacggtggtcgggaccggtcat
gcggaaaaggaacagatccgggccatggtcaaggttctgatgccgcgggccactttcaat
tcggacgatgccgccgatgcactggcaattgccatttgccatgcgcagcaccggtccaac
agtacagcgcggcttgccgccatgggggcaatatga
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