Labrenzia sp. CP4: ACP90_05280
Help
Entry
ACP90_05280 CDS
T04295
Name
(GenBank) hypothetical protein
Organism
lap
Labrenzia sp. CP4
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
He_PIG
HemolysinCabind
DUF4114
DUF642
Motif
Other DBs
NCBI-ProteinID:
AMN51933
LinkDB
All DBs
Position
1123657..1129830
Genome browser
AA seq
2057 aa
AA seq
DB search
MADTDTSANAGKPGVSSSTETAAKSNGGSEPSPARMEAQAGDPYRPAGGNDYSLSVEPED
IGEATLANLYQAVPLEDRGSGASTQDAEGLGGDGGRDGQGAHGGLGQGLGGAGTGDTLLP
DGGAEVAETADGDPNDDGGLGDGAVPEARGLDPTLSQFDLGGDGIQSSGSQVGDGTSGGT
SGGGGGAGEGGDGGNTGVGPVEDVDSTENFVTENAAGGTVVGVVAFANDPDATDTVTYSI
IDSRFEIDPDTGVITVADGAVIDRETTPYIDIEVTATSTDGSTSTGTFRITVGDENEFDI
GPVTDVDGSDNFVQENSAGGTVVGVTAFAEDPDATDTVTYSITDSRFEIDPDTGVITVAD
GAVIDRETTPFIDIEVSATSTDGSTSTGTFRIIVGDENEFDIGPVTDVDGADNFVQENSA
GGTVVGVTAFAEDPDATDTVTYSITDSRFEIDPDMGVITVADGAVIDRETTPFIDIEVTA
TSTDGSTSTGIFRITVGDANEFDIGPVTDVDGSDNFVQENSAGGTVVGVTAFAEDPDATD
TVTYSITDSRFEIDPDTGVITVADGAVIDRETTPYIDIEVTATSTDGSTSTGTFRITVGD
ANEFDIGPVTDVDGADNFVQENSAGGTVVGVTAFAEDPDATDTVTYSITDGRFDIDPDTG
VITVADGAVIDRETTPYIDIEVTATSTDGSTSTGTFRITVGDENEFDIGPVTDVDGSDNF
VRENSAGGTVVGVTAFAEDPDATDTVTYSITDSRFEIDPDTGVITVADGAVIDRETTPFI
DIELTATSTDGSTSTGIFRITVGDENEFDIGPVTDVDGADNFVQENSAGGTVVGVTAFAE
DPDATDTVSYSITDSRFDIEPDTGVITVADGAVIDRETTPYIDIEVTATSTDGSTSTGIF
RITVGDENEFDIGPVNDIDPAANSISETANGGEFAGITAFAEDPDPADSVTYQLTGDDRF
EIDPDTGGITVKNGATFDAETEPSIEMTVTATSTDGSSSTKTFTVAVTDNNEAPDLIVHL
ENGSEQFVVNGSFEIYDGVHGGPAGSGWYENPTSIEGWTYDNVDVHEAGHNSYGATDGGH
HLDLAAMNNGWASQQIEGQLDGQVYHLTFDMKSRGGVGESVAEVYWNGELIDTIDPATTG
TGWQAYAYDIVGGSGDGSNTLTFVEIGSDNLGGALIDSVSIVSDNRTAVVEEYYGAEIAP
LSVFDPDVGDTHIFTVSDDRFEVVVSGDRYLLKLKDDQAFDYETETQVTLEVTATDQGGL
SDTEIVVIDVIDIDDTNSPIGPLADIDASANQVLENAAAGAVVGLTAFANDPDAGDNVSY
QLSGDARFEIDPVSGVITVASGASFDKETEPEIDVLVTATSTDGSVSTETFTIAIADANE
APDLDFDPELGPGVSVTLTFVEEYAGHSNVLGVFYVDGNGNPVAGEIVWVNQNQLTPGDT
ATLYLEGVEASEIGYFLIPDGADTNNGLLAGDKVTFQKDGQGNWQAVGPDGTLLVGADAN
VLFSGNGSLNPDGYDYTVESGIRIGFEDIAGGGDEDFDDVVFDQTTFETTARAAVYEEDP
GAEIGTLSVFDPDVGDTHSFTVSDSRFEVISINGENILKLKDGVALDYETETQVSVEVTV
TDSGGLSDTETIVIDVIDVEPEEPADDNEPIGPVRDVDTAQNLVVATAAAGMVIGLTAFA
EDADAGDTVTYSIDDSRFDIDADTGVVTLASGATLVAGETIDVTITATSSDGSHSSAVFP
VTVTSGVTENSPPDLIVGNAIYRPDQGNKHWDDHHDGHWGHIQDGETGHYHEDDGVHGQT
YHGHDDDCTGNEYHVPENQAGVELVELSVVDPDIGDTHTFTVSDDRFEVVSNGDSYLLKL
KDDAAVDYETEQSITIDVTATDSGGLSDTETITLDVVDFDDVPLCEVGTSNADTIVGGDF
VDSISGLGGNDILLGQGGSDLIYGGAGYDVIRGGAGDDVLSGGDGSDLFAYMLGDGHDSI
YGGAGGSWIDIVDLSKAADGTDIGTYGVDWSITMTEGSIESIDAVAGEITLSQDSGGYIE
FADGGRIDFTDLEGVQY
NT seq
6174 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaccgatacttcagcgaatgcaggcaagcccggcgtttcttcttcaacggag
accgcagcaaagtccaacggcggatcagaaccgtcgcctgcacgcatggaggctcaagca
ggcgatccctaccgcccggccggtggcaatgattattccctgtccgtggaaccggaagat
atcggtgaagcaaccttggcgaacctttatcaggctgtgcccctcgaagatcgaggatct
ggtgcttcaacccaggatgccgagggacttggcggtgacggcggcagagacggccagggt
gcgcatggggggctgggtcagggattgggcggagctggaaccggtgacacgctactgccg
gacggcggtgccgaggtggccgaaaccgccgatggtgatccaaacgatgacggcggcctt
ggcgacggtgccgttccggaagcgcgtggtctcgacccgacgttgtctcaattcgatctg
ggcggcgatggcattcagtcatcgggctcccaggttggtgacggaaccagcggcggaacc
agcggcggaggcggaggtgctggcgaaggcggcgatggtgggaacaccggggtcggccct
gtcgaggacgtcgacagcaccgaaaattttgtaacggaaaacgccgcagggggtaccgtt
gtcggcgtagtcgcctttgcaaatgatccggatgcgacagacacggtcacctactcgatc
atagacagccggttcgagatcgatccggatacgggcgttattaccgttgccgatggcgcg
gtgattgatcgcgaaacgacgccttacatcgatatcgaggttacagccacctcaacggat
ggctcgacttctaccggcaccttccggatcacggttggcgacgagaacgagttcgacatt
ggcccggtgacagacgttgatggttccgacaacttcgtccaggagaactccgccggtggc
acggttgtcggcgtgacggcgttcgccgaagatcctgatgcgaccgacacggttacctat
tccatcacagacagccggttcgagatcgacccggatacgggcgttattaccgttgccgat
ggtgcagtgattgaccgcgagacgacgccttttatcgatatcgaggtctctgccacctcg
acagatgggtcaacctcgaccggcaccttccggattattgtgggcgacgaaaacgagttc
gatatcggtccggtgacggacgttgatggtgccgacaacttcgtccaggagaactccgcc
ggtggcacggttgtcggcgtgacggcgttcgccgaggatccggatgcaacggacacggtc
acctattccatcacagacagccggttcgagatcgacccggatatgggcgttattaccgtt
gccgatggtgctgtgattgaccgcgaaacgacgccttttatcgatatcgaggtcactgcc
acctcgacagatgggtcaacctcgaccggtatcttccggatcacggtgggcgacgcgaac
gagttcgatatcggtccggtgacagacgttgatggttccgacaacttcgtccaggagaac
tccgccggtggcacggttgtcggcgtgacggcgttcgccgaagatcctgatgcgacggac
acggtcacctattccattacagacagccggttcgagatcgacccggacacgggcgtgatt
accgttgccgatggcgcagtgattgaccgcgagacgacgccctatatcgacatcgaggtg
acggcgacgtccacggatggctcgacttcgaccggcaccttccggatcacggttggcgac
gcgaacgagttcgatatcggtccggtgacggacgttgatggtgccgacaacttcgtccag
gagaattctgccggtggcacggttgtcggtgtgacggcgttcgccgaagatccggatgcg
accgacacggtcacctattccatcaccgatggtcggttcgatatcgacccggacacgggc
gttattaccgttgccgatggcgcggtgattgaccgcgagacgaccccatatatcgatatt
gaagtgacggcgacgtcaacggatgggtcaacctcgaccgggaccttccggatcacggtg
ggcgacgagaacgagttcgatatcggtccggtgacagacgttgatggttccgacaacttc
gtccgggagaactccgccggtggcacggttgtcggtgtgacggcgttcgccgaagatccg
gatgcgaccgacacggtcacctattccatcacagacagccggttcgagatcgacccggac
acgggcgttattaccgttgccgatggcgcagtgattgaccgcgagacgacgccttttatc
gatattgaattgacggcgacgtcaacggatgggtcaacttctaccggcatctttcggatc
acggttggcgatgaaaacgagttcgatatcggtccggtgacggacgttgatggagccgac
aacttcgtccaggagaactccgccggtggcacggttgtcggtgtgacggcgtttgctgaa
gacccggatgcaacggatacagtttcctattccatcaccgatagtcggttcgatatcgaa
ccggatacgggcgttattaccgttgccgatggtgccgtgattgaccgcgagacgaccccc
tatatcgatatcgaggtcacagcgacgtcgacagatgggtcaacctcgaccggtatcttc
cggatcacggtgggcgacgagaacgagttcgatattggaccggtgaacgacatcgacccg
gcagccaacagcatttcagagaccgccaatgggggcgaatttgccgggatcaccgccttc
gccgaggatcctgatccggcggacagtgtcacctaccagctgactggtgatgacaggttc
gagatcgatccggatacaggtggcatcaccgtaaagaatggcgcgacgttcgatgcggaa
acagaaccttccatcgagatgactgtcaccgcaacgtcaacggatggctcttcctcaact
aagaccttcaccgtggccgtgacagacaacaatgaagcaccggatctgatcgttcatctg
gaaaacggctcagaacagtttgtcgtcaacggcagcttcgaaatctatgacggggttcac
ggcggaccagccgggtccggctggtacgaaaacccgacttcgatcgagggttggacctac
gacaacgtcgatgtgcatgaggcggggcacaatagttacggcgcgacagacggcggtcat
catttggaccttgcagccatgaacaatggctgggcttctcagcaaatagaggggcagctt
gatggtcaggtctatcatctgacattcgacatgaagtcgcgcggcggcgtgggggaaagt
gtcgccgaggtctattggaacggcgagttgatcgacacgatcgacccggccacaacggga
acgggctggcaggcctatgcctatgacatcgttggcggatccggcgacggctccaatacg
ctgacattcgttgagatcggttccgataacctgggtggtgcgctgatcgacagtgtgtcc
atcgtttccgacaaccgcactgcggtcgtcgaggaatattacggcgcagagattgcaccc
ttgtcagtattcgatccggatgtgggcgatacgcatatattcacggtttcggacgaccgg
tttgaggtggtcgtatccggcgacagataccttctcaaattgaaagacgatcaggccttc
gactacgaaaccgagactcaggtgacccttgaggtgacggcaaccgaccagggcggtctt
tccgacacggagatcgtggtgatcgacgtgatcgatatcgacgacaccaattctcccatc
ggtccgctcgccgacattgatgccagcgcaaaccaggttcttgaaaacgccgcggcaggt
gccgtcgtgggtctgactgcctttgcaaacgatccggatgcaggcgacaacgtgagttat
cagctcagcggtgacgcgcgcttcgagatcgacccggtgtcgggggtgatcaccgtcgcc
agtggggcaagtttcgacaaggaaaccgaaccggaaatcgatgttctggtgacggctact
tcgactgacggatcagtctcgaccgaaaccttcacgattgcgattgccgatgccaatgaa
gcgccggacctcgacttcgatccggaacttggaccgggcgtttccgtgacgctgaccttt
gtcgaggaatatgccggccacagcaatgtgctgggtgtcttctacgtggacggcaacggc
aatcccgtggccggcgaaatcgtctgggtcaaccagaaccaattgacgccgggcgatacg
gcgaccctctatctggaaggcgtcgaagcgagcgaaatcggctatttcctgatcccggat
ggtgcagacacgaacaatggtcttcttgccggtgacaaggtgacgttccagaaagacggt
caggggaactggcaggccgtcggacctgacgggacgctgctggtcggggccgatgccaat
gttcttttctccggtaacgggtcactcaatccggatggttacgactacaccgtggaaagc
ggcatcaggatcggctttgaggacattgccggcgggggtgacgaggatttcgacgacgtc
gtctttgaccagacaactttcgaaaccactgctcgtgccgcggtctatgaagaagatccg
ggggcggaaatcggtaccttgtcggtattcgatcccgatgtcggcgatacacacagcttc
acggtttccgatagtcgcttcgaggtcatatcgatcaacggtgagaacattctcaaactg
aaggacggtgtggcgctcgattatgagaccgagacccaggtgagcgttgaggttaccgtt
accgatagcggcgggctgtcggacacggaaaccatcgtgatcgacgtcatcgacgtggag
ccggaagagcctgccgacgacaatgagccgatcgggcctgtcagggatgtcgatacggcc
cagaatctggttgtggcgacagctgctgccggaatggtgatcggcctgacggcattcgcg
gaagatgccgacgccggagacactgtgacctattccatcgacgacagccggtttgatatc
gacgcagacaccggtgtggtgaccctcgccagtggtgcaacgctggttgcaggcgagacc
atcgacgtgacgatcaccgccacatcaagtgacggatcccattcgagcgcggttttcccc
gtgacggtgacttcgggtgtgaccgagaactcgccgcctgatctgatcgtcggcaacgcg
atctaccggccggaccagggcaacaagcactgggacgatcatcatgatggccattggggg
catatccaggacggggaaacaggacactatcatgaagatgacggtgtccacggtcagacc
tatcacggccacgacgacgactgtacgggcaacgaatatcacgttcccgaaaatcaggca
ggtgtcgaacttgtcgaactttcggtagtggaccccgatatcggcgacacgcacaccttc
acggtgtcggatgaccggtttgaagtcgtgagcaacggcgacagctatctgctgaagctg
aaggatgacgcggcagtcgactacgaaacggagcaaagcatcacgatagacgttaccgcg
accgacagcggaggcttgtcggataccgagacaattaccctggacgtggtcgactttgat
gatgtgcccctgtgcgaggtcggaacaagtaatgccgatacgattgttgggggcgatttc
gtggacagcatttccggacttggcggaaatgacatcctgctgggtcaggggggcagcgac
ctcatctatggcggggctggttacgatgtgatccggggtggcgcgggcgacgacgttctt
tccggcggtgacgggtcggatctgttcgcctacatgctcggcgacgggcatgacagcatt
tacggcggtgccggcgggagctggatcgatatcgtcgatctgagcaaggccgccgatggc
accgatatcggaacctatggtgtcgactggtccatcaccatgacggaaggttccatcgag
agcatcgatgcagtggcgggcgagatcaccctttcgcaggattcggggggctacatcgag
tttgccgatggcggacgcatcgacttcacggatctggaaggcgttcagtactga
DBGET
integrated database retrieval system
