Labrenzia sp. CP4: ACP90_07175
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Entry
ACP90_07175 CDS
T04295
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
lap
Labrenzia sp. CP4
Pathway
lap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACP90_07175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lap03019
]
ACP90_07175
Enzymes [BR:
lap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
ACP90_07175
Messenger RNA biogenesis [BR:
lap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ACP90_07175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
AMN52251
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All DBs
Position
1560515..1561759
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AA seq
414 aa
AA seq
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MTTTADQILQQADWLKTPGIQAVFAAIEQDGDEARVVGGAVRNTLLGHPVPDVDIATTAS
PQTVMERTLAAGLKPVGTGIDHGTVTVVSNGYPYEVTTLREDVETFGRQARVVFGKNWTR
DAERRDFTLNALYVDCDGRLHDPLGGLDDCLNRRVRFIGEPDKRIQEDYLRILRFFRIYA
AYGAGEMDADGLGACLRQRDGLRHLSAERIGHEMRRLLRAPLAGSALTMMNDCGLWEIAT
GGLARIDDYLALRSLEATASDVTDPELGLVVLAGFVREDVERVCDRLRLSNAERDRMRTA
WAAMKCLRQADGLPEAEHLVYQFGRQGAVDGLLGRWAGLRAQGSDPTEIFGGLLERLREV
AVPEFPVKGADLIAAGHSPGRALGDSLKALEAEWRDSGFSLSKQDLLTRAGAAT
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgactgccgatcagatcctgcaacaggcggactggctgaaaacaccgggtatt
caggcggtgtttgcggcgatcgagcaagacggcgacgaagcccgcgttgtcggtggagcc
gttcgcaacacgttactcggtcaccctgttccagacgtcgatatcgcgacgactgcctcg
ccccaaacggtgatggaacgcacgctggccgcgggcttgaagccggttggaacgggcatt
gaccacggtacggtgacggtggtcagcaacggttatccttacgaggtcacgacgctgcgg
gaggacgtggaaaccttcggccgtcaggcccgtgtcgttttcggcaagaactggacgcgc
gacgcggaacgtcgcgacttcaccctcaacgcgctctatgtcgactgcgatggccgattg
cacgatccgcttggtggactggacgattgtctgaaccggcgtgtgcgtttcatcggtgag
ccggacaagcgcatacaggaagactatctgcgcatcctccgtttcttccggatctacgcg
gcctacggggccggagagatggatgcggacgggctcggggcgtgcctgcgccagcgggac
ggcttgcggcatctgtccgcagaacgtatcggccacgagatgcggcggctgctgcgtgcg
cctctggcaggatccgcactgacaatgatgaacgattgcggcctttgggaaatcgcgacg
ggcggccttgcccgcatcgacgattacctggcactgcgcagcctggaagccaccgcaagt
gatgtgaccgatccggagctcgggctggtggtgcttgccggtttcgtgcgcgaggacgtg
gagcgcgtttgcgaccggcttcggctgtcgaatgccgaaagggaccggatgcggaccgcc
tgggcggcgatgaaatgtcttcgccaggctgatggtctgcccgaagccgagcacttggtg
tatcagttcggccgtcagggcgcggtcgacggccttttggggcgctgggcggggttgcgt
gcgcaaggatcagatccaacggagatctttggcgggctgctggagcggttgcgggaggtt
gccgtgcctgaattcccggtcaaaggcgcagatctgattgcagccgggcactcacccggg
cgcgcgttgggagatagcctcaaggctctggaggccgaatggcgcgacagcggtttctcg
ctctccaaacaggatttgctgacgcgggcaggcgctgcgacttaa
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