Labrenzia sp. CP4: ACP90_08330
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Entry
ACP90_08330 CDS
T04295
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
lap
Labrenzia sp. CP4
Brite
KEGG Orthology (KO) [BR:
lap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lap03000
]
ACP90_08330
Transcription factors [BR:
lap03000
]
Prokaryotic type
Helix-turn-helix
LysR family
ACP90_08330
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_24
MarR_2
HTH_Tnp_ISL3
HTH_29
HTH_IclR
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AMN52428
LinkDB
All DBs
Position
complement(1805032..1806198)
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AA seq
388 aa
AA seq
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MEFNLRHLRVFLSASRNSSITKAAEECRLSQPAVTQAINKLEDLLETALFQRSAHGVFVS
QVGKVFGRRVERALGLIDASFLATAPRLQVTATAAQLRAFVAVCDCANFTLAARRLGIAQ
PTVHRAVSQLEKEALKPLLERTSSGIVPSRSGQSLARAADLMFAELAQAAMEMSELKGRE
SGRIVIGAMPLSRAYILPSVVAAFRKDWPRIELQVLDGPYDELIRELRRGAVDFLVGALR
NPLPIEDVEQSALFNDSLTVMARKDHPLAGRRGLIVDDLRSWPWVVAARGTPTRGHFDRL
FKENGGQLPESVVESGSMIFARELLALSDHLACVSSLQAGREIAAGRIVALPFQLPDTSR
PIGITTRTGWEPTASQKALLALLHRYDH
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
ttggaattcaatctccgtcatctgcgcgtttttctgtccgcatcgcgcaactcatccatc
acgaaggccgcggaggaatgccgcctgtcacaaccggcggtaactcaggccatcaacaag
ctggaggacttgctggaaacggcactcttccagcgatcggctcatggcgtgttcgtctcc
caggtcggcaaggtgttcggacgccgggttgaacgagcgcttggcctcatcgacgccagt
tttctggcgactgctccccgtttgcaggtaactgccaccgcagcccagctccgggccttc
gtcgccgtttgcgattgcgccaactttacccttgccgcgcggcggcttggcattgcccag
ccgactgtgcaccgggctgtaagtcagcttgagaaggaggctctgaaaccgcttctggag
cgcacatcgagcggaatcgtgccgagccgttcaggacagagcctcgcccgcgcggccgat
ctgatgttcgctgagctcgcccaggccgcgatggaaatgtcggaactgaagggtcgggaa
agcgggcgtatagtcatcggcgccatgcccttgtcacgtgcttatatcctgccatcggtg
gtagccgccttccgaaaggactggccgcggatcgagctgcaagtcctggacgggccctat
gatgagctgatccgggaattgcggcgcggtgctgtcgattttctcgtcggcgccctgcgc
aatccgctgccgatcgaagacgtcgaacaaagcgcgctcttcaatgacagtctgacggtg
atggctcgcaaggatcatccgctggccggcagaaggggccttatcgttgacgacctaagg
tcctggccctgggtcgttgccgcccgaggcacgccgacccgcggccacttcgatcgcctg
ttcaaggagaatggcggccagttgccggaaagtgtcgtggaaagtggctcgatgatcttt
gccagggagttgctggcgttgagcgatcatcttgcctgtgtctccagcctccaggcaggc
cgggaaatcgcggcgggccgcatcgtcgccttgccgttccagctgccggacacttcccgt
cccatcggcatcaccactcgcacaggctgggagccgacggccagccagaaagcgctcctg
gcgctcctgcatcgctacgaccactga
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