Labrenzia sp. CP4: ACP90_09965
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Entry
ACP90_09965 CDS
T04295
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lap
Labrenzia sp. CP4
Pathway
lap00061
Fatty acid biosynthesis
lap00071
Fatty acid degradation
lap01100
Metabolic pathways
lap01212
Fatty acid metabolism
lap02024
Quorum sensing
lap04146
Peroxisome
Module
lap_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lap00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
ACP90_09965
00071 Fatty acid degradation
ACP90_09965
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
ACP90_09965
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACP90_09965
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lap01004
]
ACP90_09965
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lap04147
]
ACP90_09965
Enzymes [BR:
lap01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
ACP90_09965
Lipid biosynthesis proteins [BR:
lap01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
ACP90_09965
Exosome [BR:
lap04147
]
Exosomal proteins
Exosomal proteins of breast milk
ACP90_09965
Exosomal proteins of breast cancer cells
ACP90_09965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AMN52694
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All DBs
Position
2142940..2144610
Genome browser
AA seq
556 aa
AA seq
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MTTAEEWNAAFKPRPVHEYLETTVAQYGTRPACDFMGKVWTYAEFGALVDRTAAGLQAMG
VGPGVHVGLCLPNTPFYTIFYFAVLKIGATVANFNPLYVERELSFQARDADVRIMVTMDL
KVIYDKVEEVRRERALDKIIVCPMAWCLPTIKKVLFSLFKRKELADIPRDDAHIRFEDLQ
TRGDKPRPVAIDPANDIAVLQYTGGTTGVPKGAMLTHRNLSANIEQMRCVFEKARPGEEK
MLCVLPFFHVFAMTVGQNLSIILGAEMVLQPRFELKSLLEAVKRKKVTLFPGVPTIYTAI
NNSPMTANYDLTSIRICLSGGAPLPVEVKESFEKITGCILVEGYGLTETSPVAAVNPLDD
SRRAGSIGRLVPGTSARFVSIEDRETVVPAGEKGELLLHGPQVMKGYWKREDATAETITH
DGYLHTGDVGYQDDGGFIYLVDRIKDLILCSGYNVYPRVIEEAIYQHKAVDETIVIAVPD
AYRGQSPKAFIKLKEGHSLTADDMKAFLKDHLSTIELPRDYEFRDELPKTMVGKLSKKEL
VEEEAQKRAAAEARSA
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgcggaggagtggaacgcggcgttcaagccccgtccagtacacgagtatctc
gagacgaccgttgcccaatacgggacccgtcctgcctgtgatttcatgggcaaggtgtgg
acttatgccgagttcggcgcgctggtcgacaggacggctgccggattgcaggcgatgggc
gtcggcccgggtgttcacgtcggcctgtgcctgccaaacacgcctttctacacgatcttc
tatttcgcggttctgaagatcggcgccacggtcgccaacttcaatccgctctacgtcgag
cgcgaactgtcgttccaggcgcgagatgccgatgtgcgcatcatggtgaccatggatctg
aaggtgatctacgacaaggtcgaggaggttcgcagggaacgggcgctcgacaagatcatc
gtctgcccgatggcctggtgcctgccgacgatcaagaaggtgctgttcagtctgttcaag
cgaaaggaactggcggacattccccgtgatgacgcccacattcgtttcgaagacctgcag
acgaggggagacaagcccaggccggtcgcaatcgatccggcaaacgatatcgcggtgctg
cagtataccgggggcaccaccggcgttcccaagggcgcgatgctgacgcacagaaacctg
tcggccaatatcgagcagatgcgctgcgtcttcgaaaaggcgcggccgggcgaagaaaag
atgctgtgcgttctgccgttcttccacgtcttcgcaatgacggtggggcagaacctgtca
atcattctgggcgctgaaatggtgctgcagccgcgctttgagctgaagtcactgctggaa
gcggtcaagcgcaagaaagtgaccctctttccgggtgtgccgacgatctacacggccatc
aacaactcgcccatgacagcgaattacgatctgaccagcatcaggatctgcttgtcgggc
ggcgcgcctttgccggtggaggtcaaggaaagctttgaaaagatcacgggctgcattctg
gtggaagggtacggcctcaccgaaacgtcgccagttgccgcggtcaacccgctggacgac
agccgccgggcggggtccatcggaaggctggtgccggggaccagtgcccgcttcgtgagt
atcgaggaccgcgaaaccgtggttccggcaggcgagaagggcgagttgctgctgcatggg
ccccaggtgatgaagggctactggaagcgcgaggacgcgaccgccgagaccatcacccat
gacgggtatctgcatacgggtgatgtcggttatcaggatgatggcggcttcatctatctg
gtcgacaggatcaaggacctgatcctgtgctctggatataacgtctatccgcgcgtcatc
gaggaagcgatctaccagcacaaggccgtggacgagaccatcgtcattgccgtgccggat
gcctatcgcggccagagcccgaaggccttcatcaagctgaaggaaggccattcgctcacc
gccgatgacatgaaggccttcctgaaggaccatttgtcgacgatcgaactgccaagagac
tatgagttccgtgacgagttgccgaaaaccatggtcggcaaattgtcgaagaaggaacta
gtcgaggaagaagcccagaagcgggcagcggcggaagcccggagcgcctga
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