Labrenzia sp. CP4: ACP90_12835
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Entry
ACP90_12835 CDS
T04295
Name
(GenBank) pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
lap
Labrenzia sp. CP4
Brite
KEGG Orthology (KO) [BR:
lap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lap03009
]
ACP90_12835
Enzymes [BR:
lap01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
ACP90_12835
Ribosome biogenesis [BR:
lap03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ACP90_12835
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AMN55864
LinkDB
All DBs
Position
2749918..2750985
Genome browser
AA seq
355 aa
AA seq
DB search
MDARHGGRPDAEFEKNMSAIEQKQVSADEAGMRLDRWFKSHYPGLGFGHLQKLLRTGQVR
VDGKRAETNTRIAKGQMIRIPPLGVELPADDKKNAKPKSTKLIADDRKAIEDMLLFEDSQ
VMVLNKPAGLAVQGGSGLKRHLDGMLDAYTDRKGNKPRLVHRLDRETSGIILVARTRQAA
QELTKAFRHRNTQKIYWAILAGVPKPFQGRISTFLARNDGEERMQIVRQGDDEAQHAVSL
YSVFEKSGQKLSWVTMKPVTGRTHQLRAHAAHIGHPIIGDDKYFNIENWELPGGIQNRLH
LLARRIVIPHPSGHGTIDVSAPLPPHMQQTWNLLGFDATDYDPEVDDPDDALNKR
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgcgtcacggcggcaggccggatgccgaatttgagaaaaacatgtccgcgatt
gaacagaaacaagtgtccgctgatgaggcgggcatgcgcctcgaccgttggttcaagtcc
cattacccgggccttggatttggtcatctgcagaaactgctgcgtacggggcaggtccgc
gtcgacggcaagcgtgccgagaccaacacccgtatcgccaaggggcagatgatccgtatt
ccacctctcggggtggaacttccggcggacgacaagaagaatgccaagccgaaatccacc
aagctgattgctgacgaccgcaaggccattgaggacatgctgctgtttgaagacagccag
gtaatggtgctcaacaagccggcaggtcttgctgttcagggcggttcaggcctcaagcgc
catctggatggcatgctggacgcctataccgaccgcaagggcaacaagccgcgtctggtg
caccgtcttgaccgtgagacctccggcatcattctggttgcccgtacgcgtcaggccgcg
caggaactgacaaaggccttccgtcaccggaatacccagaagatctactgggcaatcctg
gcgggtgttccgaagccgtttcagggccgcatttccaccttcctggccagaaatgacggc
gaagaacgcatgcagatcgtgcgtcagggcgacgatgaggcacagcacgccgtgtcgctc
tattccgtcttcgaaaagtccggccagaagctttcctgggtgacgatgaagccggtgacg
ggccgaacgcaccagttgcgcgcacatgcggctcatatcggccatccgatcatcggtgac
gacaagtatttcaatatcgagaactgggagctgccgggtggtatccagaaccgcctgcat
ctgctggcgcgccggatcgtgatcccgcatccgtcgggccatggcacgatcgatgtttcg
gcaccgctgccgccacacatgcagcagacctggaatctgctcggatttgatgcaacggac
tatgatccggaagtggatgatccggacgacgcgctcaacaagcgctga
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