Labrenzia sp. CP4: ACP90_13030
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Entry
ACP90_13030 CDS
T04295
Name
(GenBank) DEAD/DEAH box helicase
Organism
lap
Labrenzia sp. CP4
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Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
AAA_30
Flavi_DEAD
DUF3638
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AMN55873
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Position
2791223..2794462
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AA seq
1079 aa
AA seq
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MFDAATASLLRSAPELPGLDPSELPAILTSHYAELASMRLRGAEVESSSEEGDWSLERIA
DSYELAVSLQPESSARAAAAFVAGTAQQILARRQLTANDGDELPPNIDRDRLDPSVAAAI
LFLASEQYADANEAAVNIETNRAGQLYEATILSEHIQDLAKGRLNQILKRAARWRRPIDY
IDLDIRALAALLEALSTGIEMLAAQMLRVDAPEQTGTRFVGPQQAFQRVLELSSSNYDIA
IGAPQGLNILYAGPYHLASLLLAVANSISEASLLNTPAPFDSNAEVWERWLRFRAAKFPY
VWSNHREAIANEFHQTGVSSVVVLPTGAGKTTVSSLKIAGVLARGKKVAFLAPTHALVDQ
LTEDLQEMFPSELLGSVVSSDFDLLMQDAAVFRDIEVMTPERCLAMLSFAPDAFKDVGLL
VFDECHLLSPESGKIRRALDAMLCVLGFSHVAPEADFLFLSAMLKNGDELAQWLQELTGR
KSIAVDLLWKPSRQARGVIIYEDDQLNRASTQALEVQIAEDKKNNSVARNLRAPAARQLT
ATPYAIWGLQHNWLSQEESIAHCVTTQLLEDQVTLTGNIRFGRLQLTPNANHVAVELAAA
AAKQGLKTIVFVNTKRDAVSVAKQISSLLSQEVEITPIEQVRWDALELELGSLDHSLLSG
PATAVPHNSAMLRLERDIAERMFKRSDGAQVIVATPTLAQGLNLPAQLAVLAGDKRADPV
KGGRENLEAHEILNAAARAGRAGHLANGLVLLIPEPIITFKKEEPLENDVVDKLQAILPE
DDHCVTVTDPLEIVLDRLIQGQATDPDVNYTINRMAILRSVDESSEATHLFDLRKSLGSF
AAKRREEEKEFDDKIEALRKVVTSEEVEEVDHNVAVLSSQSGLPAKLLVDLRGRIIADIG
SLPTNVSGWLEWMIKWLQEHEDARSALLGDISGSILSACGEAKNAELTKEHLDLLLAALI
AWVEGKSLREIEAILGGEPDSATPTKKICPRARELVGTIVPRGISFAVGLIAHMLEDVDP
FDKQEDLDRQLIECLGTAVRKGLNEVAMLFFASEKKDLICRVQIHEAWKNRGQELFGAT
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgcagcgacagccagtctattgcggtcagcgccggagctaccaggtctagat
cccagtgagctgcctgccattctcacctcccattatgcggaattagcatcaatgcgtctt
aggggtgctgaagtggaatccagtagcgaagagggcgattggagcctcgaacgaatcgca
gactcatatgaacttgccgtttcgctgcaacctgagagttcggcacgcgctgcagctgcg
tttgttgccggaacggcccagcaaatcctcgccagaaggcaacttactgcgaatgatgga
gacgagttaccacccaacattgaccgggatcggcttgatcctagtgtggcggcagcgatc
ctatttcttgcgtcagaacagtatgccgatgccaatgaggctgcggttaatatcgagaca
aatcgagcaggacaactctatgaggccacgattctctcagagcatatccaagatcttgca
aagggacggctaaatcaaatcctgaagcgggccgcaagatggcgtcggcctattgattac
attgacttagacattcgcgcgcttgcagcgctgcttgaggcactttccaccggtatcgaa
atgctggccgcacaaatgcttcgggtggacgctcccgaacagactggcactcgatttgtt
ggacctcagcaagccttccaacgcgtactcgaactttcttcatccaattatgacatcgca
atcggtgcccctcaagggctcaacattttatacgccggtccgtaccatctcgcgtccctt
ttgctcgctgtggcgaactcgatctctgaggctagtctgcttaatactccagcgccattc
gattcaaacgccgaagtctgggagagatggctccggtttcgcgccgcaaagttcccatat
gtttggtctaatcaccgcgaggcaatcgccaacgaattccatcaaaccggcgtttcctca
gttgtggttctccccacgggtgctgggaagacgaccgtttcctctctgaagattgctggc
gtccttgctcggggcaagaaagttgcctttctcgctcccactcacgcactcgttgatcag
ctaaccgaagacctgcaagaaatgtttccgagcgaattgcttggatcagtcgtttcaagc
gatttcgaccttctcatgcaggatgctgctgtctttcgtgacatcgaggtcatgacacct
gaacggtgtttggccatgctctcgtttgcgccggatgcgttcaaagatgtaggcttgctt
gtttttgacgagtgccatctgcttagccccgagagtggaaaaatacgccgtgccctcgat
gctatgctgtgcgttttggggttcagccacgtcgcgccggaagctgatttcctcttcctg
tccgccatgctaaaaaacggcgatgagttggcacaatggctccaagagctcacaggccga
aaatccatagccgttgacctgctgtggaaaccaagtcgtcaggctcgcggtgtaatcatt
tatgaagacgaccaactcaatagagccagcactcaagctcttgaagttcagatcgcagaa
gacaagaaaaataatagcgtggcgaggaatttgcgagcaccggctgcaaggcagctaacg
gcaaccccctatgcaatctgggggcttcagcacaattggctatcccaagaggaatcgata
gcgcattgcgtcacaacacaactacttgaagatcaagttacgcttaccgggaatattaga
tttggccgacttcagctcacgcccaacgctaatcacgtagctgtcgaacttgctgcagct
gctgccaagcaaggtctcaagactattgtcttcgtcaacactaagcgggacgcggtttcg
gttgcaaaacaaatatcaagcttgctgtcacaagaggtcgaaataactccaatcgagcag
gtgcgttgggatgcacttgaattagaacttggcagtttagaccattctcttctctctggg
ccagctactgcggtaccacataactcagcaatgctcagacttgagcgtgatatcgccgaa
cgaatgtttaagcgttctgacggcgcccaagtaattgtcgccacgccaactttggctcag
ggcctaaacttgccggcccaactcgcagttttggccggagacaagcgtgctgaccctgtt
aaaggtggtcgtgaaaatctcgaagcccatgaaatcctaaatgcggcggctagagctggg
cgcgcggggcatctcgcgaatggactagtgctccttattcctgagccgatcatcaccttt
aagaaagaagagccgctggaaaatgatgtagtcgacaaacttcaagccattttgcccgaa
gatgatcattgtgtgacagttaccgatcctcttgaaatcgttcttgatcgcctaatccaa
ggtcaagctaccgatcccgatgtcaattacacaattaatcggatggcgatccttcggagt
gtggatgaatccagcgaagctactcacctatttgatctgcgtaagtccttgggctctttt
gcagcaaaacgaagagaagaagaaaaagagtttgacgacaagattgaagctttaaggaaa
gtcgtcacaagcgaagaggtcgaagaggtagatcacaatgttgcggttctgtcctcacag
agcggtttgcctgcaaaattgctagttgatctaaggggccggatcatagccgatattggt
tcgcttccaacgaatgttagcggttggttggaatggatgatcaaatggctgcaagagcat
gaggacgcccggtcagcgcttctcggagatataagcggaagcatcttatctgcatgcggc
gaagccaagaatgccgaactaacaaaagaacatctcgaccttcttttagctgcgctgata
gcttgggttgaaggaaagtcacttcgggagattgaggcaattcttggaggggagcccgat
agtgctacacctactaagaaaatatgcccgcgagcacgtgagctcgtgggcacgattgtc
ccgcgaggtatttcttttgccgtagggctgattgcgcacatgcttgaggatgtggaccct
ttcgacaaacaagaggatctcgaccgccagttgattgagtgtcttggtacagctgtgaga
aaagggctcaatgaagttgcgatgctgttttttgcctcggagaaaaaagacttaatttgt
cgggttcagatccatgaagcttggaaaaatcgcgggcaagagctctttggcgcgacatag
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