Labrenzia sp. CP4: ACP90_17060
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Entry
ACP90_17060 CDS
T04295
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
lap
Labrenzia sp. CP4
Brite
KEGG Orthology (KO) [BR:
lap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lap03000
]
ACP90_17060
Transcription factors [BR:
lap03000
]
Prokaryotic type
Helix-turn-helix
LysR family
ACP90_17060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_28
HTH_23
HTH_29
HTH_24
HTH_30
MarR_2
Phosphonate-bd
HTH_5
HTH_20
YdaS_toxin
P22_Cro
Motif
Other DBs
NCBI-ProteinID:
AMN53846
LinkDB
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Position
complement(3709410..3710303)
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AA seq
297 aa
AA seq
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MTLSLSRIRAVNAVASGGSYAAAARALKISQPAVARHVKDLEAEFGVRLFDRKNGVLSPT
PLCNELCDVAERMAEAERAATRLLTRHNTLLNGRLKIGLGNSMPGMALIAQFLKRHPGIE
IAVETGSHERITRAVLTREVDIGVLPDVPADGRFRRALLARQNVVAIVHPDSPLSREAAV
TCERLMAEPLIFRTRGSSTQRVVDRAFRSAGFEPSPLLTLDTRDAVYEAVVNGLGVGFMW
RFGTGRTDVVHRVPVSDMQRQYEEVVFSLGDERSMLFDVFFSAVESFRTEADDILDH
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgacactttccctgtcgcgcattcgggccgtgaacgcggtcgcgtccggaggttcatat
gctgcagcggcacgggcgctgaagatttcgcagccggccgtcgcgcgtcatgtcaaagac
cttgaagcggaattcggcgtacgcctgttcgaccggaaaaacggtgtgttgtcgccaacc
cccctgtgcaacgagctatgcgacgtcgccgaacgcatggcggaagccgaacgcgcagca
acacggcttttgacccgccacaacaccttgctgaacggtcgtttgaaaatcggattggga
aattcgatgccgggcatggcgttgatcgcgcagtttctcaagcggcatccgggcatcgaa
attgcggtggaaacaggttcgcatgagcggatcacgcgggcagtgctgacccgcgaagtc
gacatcggtgtgctgccggatgtgcctgcggatggccgtttccggcgcgccttgcttgca
aggcagaatgtcgttgccatcgtccatcccgacagcccgctgtcccgggaggcggccgtg
acctgcgaacggctgatggccgaacccctgattttccggacaaggggatcctccacccaa
cgggtggtcgacagggcctttcgttccgccgggttcgagccgtcgccgctgttgacgctg
gacacccgtgacgcggtttatgaagcagtggtcaatggcctcggggtcggtttcatgtgg
cggttcggaaccgggcgaaccgatgtcgttcaccgggttccggtctcggacatgcaacgc
caatacgaggaagtggttttctcgcttggcgacgagcgcagtatgctgttcgacgtattc
ttttccgccgtggaaagcttccgcacggaggcggacgacattctggaccactag
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