Labrenzia sp. CP4: ACP90_18020
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Entry
ACP90_18020 CDS
T04295
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lap
Labrenzia sp. CP4
Pathway
lap00260
Glycine, serine and threonine metabolism
lap00460
Cyanoamino acid metabolism
lap00630
Glyoxylate and dicarboxylate metabolism
lap00670
One carbon pool by folate
lap00680
Methane metabolism
lap01100
Metabolic pathways
lap01110
Biosynthesis of secondary metabolites
lap01120
Microbial metabolism in diverse environments
lap01200
Carbon metabolism
lap01230
Biosynthesis of amino acids
lap01240
Biosynthesis of cofactors
lap04981
Folate transport and metabolism
Module
lap_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
lap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
ACP90_18020 (glyA)
09102 Energy metabolism
00680 Methane metabolism
ACP90_18020 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
ACP90_18020 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
ACP90_18020 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
ACP90_18020 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
ACP90_18020 (glyA)
Enzymes [BR:
lap01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
ACP90_18020 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AMN54005
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Position
complement(3914243..3915553)
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AA seq
436 aa
AA seq
DB search
MSLMESSDQSLQSGFFTRSLAEADPDIFDTIGKELGRQQHEIELIASENIVSRAVLEAQG
SIFTNKYAEGYPGKRYYGGCEFADIAETLAIERAKELFGCQFANVQPNSGSQMNQAVFLA
LLQPGDTFMGLDLNSGGHLTHGSPVNMSGKWFNVVSYGVREDDHLLDMDEVERLANEHKP
KLILAGGTAYSRIWDWKRFREIADSIGAYLMVDMAHIAGLVAGGVHPSPVPHAHVVTTTT
HKSLRGPRGGMILSNDEAIAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALQPEFKAYAR
AVQENAKVLAEVLKEQGLDIVSGGTDNHLMLVDLRPKNATGKVAEKSLGRANITCNKNGI
PFDPEKPFVTSGVRLGTPAATTRGFGVAEFREVGLLITEVLDGLKAANSEEGNAAVEAAV
KAKVEALTARFPIYGG
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgatggaaagctccgatcagtccctgcagtccggtttcttcacccgcagcctt
gctgaagccgatccggatatcttcgacacgatcggcaaggaactcggccgtcagcagcat
gaaatcgagctgattgcttcggaaaacatcgtttcccgcgcagtgctggaagcacagggc
tcgatcttcaccaacaaatatgccgaaggttatccgggcaagcgctactatggcggctgt
gaattcgccgacattgccgaaacgctggcaatcgagcgcgcgaaggaactgttcggctgc
cagtttgccaacgttcagccgaactccggcagccagatgaaccaggcggtgttcctggct
cttctgcagcctggcgacaccttcatgggcctggatctcaactccggtggtcacctgacc
cacggttctccggtcaacatgtccggcaagtggttcaacgtcgtctcctatggcgtgcgt
gaggacgaccatcttctcgacatggatgaggtcgagcgccttgccaacgaacacaagccc
aagctgatcctggccggcggcactgcctattcccgtatctgggactggaagcggttccgc
gaaatcgccgacagcattggcgcttatctgatggttgacatggcgcacatcgccggtctg
gttgctggtggcgttcacccgtcgccggtgccgcacgcccacgtcgtcaccaccaccacc
cacaagtccctgcgcggcccgcgcggcggcatgatcctgagcaacgacgaagcgatcgcc
aagaagatcaactcggccgtcttcccgggtcttcagggtggcccgctgatgcatgtcatt
gctgccaaggccgttgccttcaaggaagcactgcagccggaattcaaggcttatgcccgt
gccgttcaggaaaatgccaaggttctggctgaagtcctgaaggagcagggtctggatatc
gtttccggcggcaccgacaaccacctgatgctggtggatctgcgtccgaagaacgccacc
ggcaaggtggctgagaaatctctcggccgggccaacatcacctgcaacaagaacggtatc
ccgttcgacccggaaaagccgtttgtcacgtctggcgttcgtctcggcactccggcagcg
accacacgcggcttcggtgttgcggaattccgcgaagtcggtctgctgatcacggaagtg
ttggacggtttgaaggccgcaaacagtgaagagggcaacgcggcagttgaagcggcggtc
aaagccaaggtagaagcactgacggcccggttcccgatctacgggggctaa
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