KEGG   Labrenzia sp. CP4: ACP90_18130
Entry
ACP90_18130       CDS       T04295                                 
Name
(GenBank) ribonuclease
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
lap  Labrenzia sp. CP4
Brite
KEGG Orthology (KO) [BR:lap00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    ACP90_18130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lap03019]
    ACP90_18130
   03009 Ribosome biogenesis [BR:lap03009]
    ACP90_18130
   03036 Chromosome and associated proteins [BR:lap03036]
    ACP90_18130
Enzymes [BR:lap01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     ACP90_18130
Messenger RNA biogenesis [BR:lap03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ACP90_18130
Ribosome biogenesis [BR:lap03009]
 Eukaryotic type
  90S particles
   RNase
    ACP90_18130
 Prokaryotic type
  rRNA processing factors
   ACP90_18130
Chromosome and associated proteins [BR:lap03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     ACP90_18130
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM RM44_endonuclase
Other DBs
NCBI-ProteinID: AMN54024
LinkDB
Position
3936387..3937097
AA seq 236 aa
MKRQLHQPGPISALKTALQYEFQDLELLRVALTHASALAPSETVSGSYQRLEFLGDRVLG
LVIASMLHKHFPKADEGELARRFNHMVKRETCAEIAQELGVGDAMRIGLAEAQTGGRKKT
ALLADICESVIAAIYLDGGFEAAESFITRLWEPRMLSWSGPLRDAKTTLQEWAQSKSLPT
PRYDVTGRDGPDHAPNFTVSVTVQGLPPGEGKGGSKRIAEQNAAEAVLRREGVWKE
NT seq 711 nt   +upstreamnt  +downstreamnt
atgaaaagacaactgcatcaaccaggtccgatttcggccctgaaaacggcactgcaatat
gagtttcaggacctggaactcctgcgggtcgcgctgacccatgccagtgcccttgcaccg
tctgaaacagtgtcgggcagttatcagcgtctggaattccttggagaccgtgttctcggc
ctcgtgatagcttccatgctgcacaagcattttcccaaggctgacgaaggtgagttggcg
cggcgtttcaaccacatggtcaagcgcgaaacctgcgcggaaattgcccaggaacttggt
gtcggcgatgcgatgcgcatcgggcttgcagaagcacagaccgggggccggaagaaaact
gccctgctcgccgatatttgcgagtcggtcattgccgcgatttacctggacggcgggttt
gaggcggccgaaagcttcattacgcgcctttgggagccgcgtatgctatcctggtcgggt
ccactgcgcgacgccaagacaacgctgcaggaatgggcacaatcgaagagcctgccgaca
ccgcgatatgatgtaacaggccgggacggaccggaccacgcaccgaatttcaccgtgtcg
gtgaccgttcagggactgccgccaggcgaaggcaagggtggctccaaacggattgcggaa
cagaatgcggcagaggccgtattgcgccgggaaggcgtctggaaggaataa

DBGET integrated database retrieval system