Labrenzia sp. CP4: ACP90_21490
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Entry
ACP90_21490 CDS
T04295
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lap
Labrenzia sp. CP4
Pathway
lap00260
Glycine, serine and threonine metabolism
lap00460
Cyanoamino acid metabolism
lap00630
Glyoxylate and dicarboxylate metabolism
lap00670
One carbon pool by folate
lap00680
Methane metabolism
lap01100
Metabolic pathways
lap01110
Biosynthesis of secondary metabolites
lap01120
Microbial metabolism in diverse environments
lap01200
Carbon metabolism
lap01230
Biosynthesis of amino acids
lap01240
Biosynthesis of cofactors
lap04981
Folate transport and metabolism
Module
lap_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
lap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
ACP90_21490
09102 Energy metabolism
00680 Methane metabolism
ACP90_21490
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
ACP90_21490
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
ACP90_21490
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
ACP90_21490
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
ACP90_21490
Enzymes [BR:
lap01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
ACP90_21490
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
Aminotran_5
SelA
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AMN54548
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Position
4680241..4681563
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AA seq
440 aa
AA seq
DB search
MTAQDKCPWLPAVAATRIDEITQATSPLGSEGIAARIEALAEANRTIHEKDCFNLNPATN
VMNPRAEALLASGMGSRPSLGYPGDKYEMGLEAIEEIEVIAANLACEIFQSAYAEIRVAS
GALANLYAFMATTRPGDAIIAPPASVGGHVTHHAPGCAGLYGLDIHEAPVDADGYTIDLE
GLRALALKVRPKLITIGMSLNLFPHPVKEIRAIADEVGAFVLFDAAHQCGMIAGGVFSDP
LSEGAHLMTMSTYKSLGGPAGGLIVSNDQDLARKLDKIAFPGLTANFDVAKSAALAITLL
DWRDFGKAYAAEMAASAGALAAGLEAEGMPVFSTAKGTTASHQFALEAAALGGGQAASKK
LRQAGFLACGIGLPIAPVAGDMNGLRFGTPELVRWGMTTVDMPELAKLVAEALRSNDPAA
MAGRVAKWRRSFNTLHFIHP
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgcaagacaaatgcccctggctccccgctgtggctgccacccgtatcgacgag
atcacccaagcaacttcgcctctcggatccgaaggaattgccgcgcgcatcgaagcgctg
gccgaggccaacaggaccatccacgagaaagactgtttcaatctcaaccccgcgaccaac
gtgatgaacccgcgcgccgaagccttgctggcaagcggcatggggtcccgcccctcgctc
ggctacccgggtgacaaatatgagatgggcctcgaagccatcgaggaaatcgaggtgatt
gcagcgaaccttgcctgcgagatcttccagtcggcttatgcggaaatccgggtcgcctcg
ggcgcgctggcaaatctttatgcattcatggcaaccacaaggccgggcgacgccatcatc
gcaccgcctgcgtccgtcggtggccacgtcactcaccatgcgccggggtgtgccggtctt
tatggcctggatatccacgaagcaccggtcgatgccgacggctacacgatcgatctggaa
ggtctgcgcgccctggccctgaaggtccggccgaagctgattactatcggcatgagcctc
aacctgttcccgcacccggtgaaagaaattcgggccattgccgatgaagtcggcgccttt
gtcctgttcgatgcagcccatcagtgcggcatgattgccggtggcgtcttttccgacccg
ctatcggaaggcgcacatctcatgaccatgagcacctacaagagcctgggtggtcccgct
ggcgggctgatcgtcagcaatgatcaggatcttgcccgaaagctcgacaagattgccttt
ccgggtctgacagccaactttgacgttgcaaagtctgcagcgctcgccatcacccttctg
gattggcgcgatttcggcaaggcctacgctgccgaaatggccgccagcgccggtgcgctc
gccgctggtctcgaagcagagggaatgccggtgttctctaccgccaaggggacaaccgct
tcacatcagtttgccctggaagcggcagccctcggcggcggtcaggcagcttcgaagaag
cttcgtcaggcagggtttctggcatgcggaatcggactgccgatagcgcccgtcgccggt
gacatgaacggcctgaggttcggaacaccggaactggtccgttggggcatgacgacggtc
gacatgccagagctggccaaactggtagccgaagcgctgcgatcgaacgatccggcagcg
atggcaggacgcgtggccaaatggcgccggagtttcaacacgctccacttcatccaccct
tga
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