Labrenzia sp. CP4: ACP90_21660
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Entry
ACP90_21660 CDS
T04295
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
lap
Labrenzia sp. CP4
Pathway
lap00071
Fatty acid degradation
lap00280
Valine, leucine and isoleucine degradation
lap00310
Lysine degradation
lap00362
Benzoate degradation
lap00380
Tryptophan metabolism
lap00410
beta-Alanine metabolism
lap00640
Propanoate metabolism
lap00650
Butanoate metabolism
lap00907
Pinene, camphor and geraniol degradation
lap00930
Caprolactam degradation
lap01100
Metabolic pathways
lap01110
Biosynthesis of secondary metabolites
lap01120
Microbial metabolism in diverse environments
lap01200
Carbon metabolism
lap01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
lap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
ACP90_21660
00650 Butanoate metabolism
ACP90_21660
09103 Lipid metabolism
00071 Fatty acid degradation
ACP90_21660
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
ACP90_21660
00310 Lysine degradation
ACP90_21660
00380 Tryptophan metabolism
ACP90_21660
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
ACP90_21660
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
ACP90_21660
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
ACP90_21660
00930 Caprolactam degradation
ACP90_21660
Enzymes [BR:
lap01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
ACP90_21660
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
ACP90_21660
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
ACP90_21660
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
DAO
UDPG_MGDP_dh_N
NAD_binding_2
F420_oxidored
ApbA
Sacchrp_dh_NADP
NAD_Gly3P_dh_N
FAD_binding_3
NAD_binding_8
2-Hacid_dh_C
Pyr_redox_2
TrkA_N
RS_preATP-grasp-like
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
AMN54575
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Position
4725178..4727388
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AA seq
736 aa
AA seq
DB search
MSYKNFTVETDEDGFALITWDMPEKSMNVIDLSVMDELDAIVDQVASDDAIKGAVITSGK
SAFSGGADLTMLEGLLKDFHIKRGNDAEAAAKALFEGSRKLSQVYRKLETCGKPFVAAVA
GTCMGGGTELALACHGRVVDEGLKMGLPEVKVGLFPGAGGTQRVMRMTDGQQGMQFLLQG
RTLRAPQAKQMKLVDEVAPTKKLVAAAKKMLKAGLDPVKDWDKKGYKLPNGKVYSPAGFQ
FWPAANAIYRRETYDNYPGARYLLRSVVEGLQLPMDLALQVESRYFAKVLQAPEAANMIR
SLFVSMQELNKLARRPVDQRPNKIRKIGILGAGFMGAGIAYVTAQAGIDVVLIDRDQEAA
DKGKAHSEELITKAIKRGRASEEQKEKLLSKITATVDYEALADCDLVIEAVFEDREIKKA
VTEKAEAVMKSRAIYASNTSTLPITSLAQASKRPKNFIGIHFFSPVDKMMLVEVILGKRT
SDRALAMALDYIKAIKKTPIVVNDSRGFYTSRVVMTYIREGLMMLADGVPAAMIENAGKM
AGMPVGPLSLGDEVALDLAWKIVSATRKDLGVKYVEGPLDNILEEMVVKQERFGRKNGKG
FYDYKGKDKSLWPGIPEVTGQPKPAESFNIEELKQRLLVMQALETARIFEEKCLTDVREA
DVGSILGFGFAPYTGGTLSYIDMMGTPAFVDLCKKFTRKWGPRFKPNKLLKDMAKENETF
YGKFPPKAEAKVKDAA
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgagctacaagaatttcaccgttgaaaccgatgaggacggttttgccctgatcacctgg
gacatgccggaaaaatcgatgaacgtcatcgatctgtcggtcatggacgagctggatgcg
attgtcgaccaggtggcaagtgacgacgccatcaagggggccgtgatcacgtccggcaag
tccgccttttccggtggtgccgacctgaccatgctggaagggcttctgaaggacttccac
atcaagcgcggtaacgatgcggaagctgcagccaaggctctgttcgaaggatcgcgcaag
ctttctcaggtctaccgcaagctggaaacctgcggcaaaccgttcgtcgccgccgttgcc
ggcacctgcatgggcggcggtaccgagctggcactggcctgtcatggccgcgtcgttgac
gaaggcctgaagatgggtctgccggaagtcaaggtaggcctctttccgggcgccggcggc
acccagcgtgtcatgcgcatgacggacggacagcagggcatgcagttcctgctccagggc
cgcaccctgcgggcaccccaggccaaacagatgaaactggtggatgaagtcgccccgacc
aagaaactggtcgccgccgccaagaagatgctgaaggcaggcctcgacccggtcaaggac
tgggacaagaagggttacaagctgccaaacggcaaggtctattccccagccggtttccag
ttctggccggccgccaatgcgatctaccgccgcgagacctatgacaactatccgggtgcc
cgctacctgctgcgctccgtcgtcgaaggtctgcagctgccgatggatctcgcgcttcaa
gtggaaagccgctacttcgccaaggtgctgcaggccccggaagccgccaacatgatccgc
tcgctgttcgtctccatgcaggagctgaacaagctggcccgccgcccggtggatcagcgt
ccaaacaagatccgcaagatcggcattctcggcgcaggcttcatgggtgcaggcattgcc
tatgttacggcacaggcgggcatcgacgtcgtcctgatcgaccgcgaccaggaagccgcc
gacaagggcaaggctcattcagaagagctgatcaccaaggcgatcaagcgtggccgggcg
agcgaggagcagaaggaaaagctgctgtcgaagatcaccgccaccgtcgattatgaagcc
ctggcagattgcgatctggtgatcgaagccgtcttcgaagatcgtgagatcaagaaggcg
gtgacggagaaggccgaggcggtgatgaagtctcgtgccatctatgcttccaacacctcg
acactgccgatcacctccctggcgcaggcgtccaagcggccgaagaacttcatcggcatt
cacttcttctcgcccgtcgacaagatgatgctggtggaagtgatcctcggcaagcgcact
tccgatcgcgcgcttgccatggcgctcgactatatcaaggccatcaagaagaccccgatc
gtcgtcaatgacagccgcggcttctatacctcgcgtgtcgtcatgacctatatccgcgaa
ggtctgatgatgcttgcggacggcgttccggcagcgatgatcgagaatgcgggcaagatg
gccggcatgccggtcggaccgctgtcgcttggcgatgaagtggcgctggatcttgcctgg
aagatcgtttccgcaactcgcaaggacctcggcgtcaaatatgtcgaaggcccactcgac
aacatcctggaagagatggtggtgaagcaggagcgtttcggccgcaagaacggcaagggc
ttttacgactacaagggcaaggacaagagcctgtggcccggcattccggaagtcaccggt
cagccgaaacctgcagagagcttcaacatcgaggaactcaagcagcgtctcctggtgatg
caggcgctcgaaaccgcccgcatcttcgaggaaaagtgcctgacggacgtgcgtgaagcc
gatgtcggctccatccttggcttcggcttcgccccctataccggcggtacgctcagctat
atcgacatgatgggcacgccggcctttgtcgacttgtgcaagaagttcacccgcaagtgg
gggccgcgcttcaagccgaacaagctgctgaaggatatggccaaggaaaacgagacgttc
tacggcaaattcccgccgaaggccgaagcgaaggtcaaggacgcagcctga
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