Labrenzia sp. CP4: ACP90_22190
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Entry
ACP90_22190 CDS
T04295
Name
(GenBank) RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lap
Labrenzia sp. CP4
Brite
KEGG Orthology (KO) [BR:
lap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lap03009
]
ACP90_22190
Enzymes [BR:
lap01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
ACP90_22190
Ribosome biogenesis [BR:
lap03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ACP90_22190
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
MTS
Methyltransf_31
Methyltransf_25
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
AMN54660
LinkDB
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Position
4846757..4847989
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AA seq
410 aa
AA seq
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MSEREIEITTLGHRGDGVAETETGPIYLAGALPGEIVRAKVVDGRAQKPVIEKPSPDRIE
PVCRHYSACGGCSVQHLAEEPYLVWKSGLVEKALRDRGIETEVSGTIAATMGGRRRAVLT
ATRAGRHTLLGYHEKASHRLVDIAECPVLDPVIVEALPGLKSLASEVLPKKGELRMTVLV
TTTGLDVALDKADKGYERKIPALSQKVVDQNLARLSVNGEVILELRPPLLDMGGIGIVAA
PGGFAQATLAAEHALSKLVIDGVGKAKTIADLFSGVGTFALRLGRQANVHAVEGDAAALA
AFDKALRKPQGLKKVTFERRDLSRRPLVKEELEPYDAVVFDPPRAGAQAQAEQLALSKVK
TIVAVSCNPATLARDLRILLDGGYVLQSVTPVDQFHYSPHIEAVAVLTRP
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagagagagattgaaatcaccacgctcggtcaccgcggcgacggcgttgccgag
acggagaccgggccgatctacttggccggggccctgcccggggaaatcgtccgggcgaaa
gtcgtggacgggcgcgcccaaaagcctgtgatcgaaaagccgtcgccggaccggatcgaa
cccgtgtgccgtcattactccgcctgcggcggctgttccgtacagcaccttgcggaagag
ccataccttgtctggaaaagcggccttgtcgaaaaggccttgcgcgaccgcggcatcgag
accgaagtttccgggacgatagctgcgaccatgggagggcgacgccgggctgtactgacg
gccacccgcgccggacgccacaccttgctcggttaccatgaaaaggccagccacaggctg
gtcgatatcgccgaatgcccggtgctcgacccggtcatcgttgaagcgctgcccggtctc
aagtcccttgcctcggaagtgctgccgaaaaagggtgaactgcggatgaccgtcctggta
acaaccaccggtctggatgtggctctcgacaaggccgacaagggatacgagcgcaagatc
ccggccctgtcgcaaaaggtcgtcgatcagaaccttgcccggctttcggtcaacggtgaa
gtcattctggagctgcgcccgccgctgctcgacatgggcggcatcggcattgttgccgcg
cccggtgggtttgcccaggcgacactggcggcggaacatgcactttccaagctggtaatt
gacggtgtcggcaaggccaagacaattgcagatctcttttccggtgtcggcacattcgcg
ctcaggctcggccgacaggcaaatgtgcatgcggtcgaaggcgatgctgcggcactggcc
gcctttgacaaggccctgcgcaaaccccaaggcctgaagaaggtgacctttgaacggcga
gacctgtcacgcaggccgctggtaaaggaagagctggagccttacgacgccgtggttttc
gacccgccgcgcgcaggcgctcaagcccaggcagagcaactggcgctttccaaggtcaag
acgattgttgccgtctcctgcaatccggcgacgcttgcccgggatctgcgcatcctgctc
gacggcggttacgtgctgcaaagcgtcacaccggtggaccagttccactattcgccccat
attgaagcagtggcggtgttgacaagaccttga
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