Labrenzia sp. CP4: ACP90_25385
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Entry
ACP90_25385 CDS
T04295
Name
(GenBank) RpiR family transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
lap
Labrenzia sp. CP4
Brite
KEGG Orthology (KO) [BR:
lap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lap03000
]
ACP90_25385
Transcription factors [BR:
lap03000
]
Prokaryotic type
Helix-turn-helix
Other families
ACP90_25385
SSDB
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Paralog
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_IclR
MarR
HTH_23
HTH_Tnp_ISL3
HTH_17
Fe-ADH
HTH_24
HTH_AsnC-type
HTH_3
MerR
TetR_N
HTH_11
MarR_2
HTH_65
HTH_29
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
AMN55165
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All DBs
Position
5516898..5517821
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AA seq
307 aa
AA seq
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MQAKIRTPTGDNTNGHAAIDLISALRDHAGQFPAREQKVADYVQKHLSAISDMTIAELAK
ACGVSTPTVVRFCRTLGCDGFREFKLRLAQNLAVSLQYISAPSTTEQVASETAIDRVLGA
LYATANVMRQQVDPAVIERAVEKIAKCRQLLTAGIGGGSTMVAGEAASRFFRLGIPSVAL
HDSYLLQMRAATLGPDDVLLCVSASGEADELVSAAEIAGGYGATTIAIAPKGSRLAMISK
IPILVDLPEDPDIFKPTASRYAHLVIVDAIAMTVAQVRAATTSENLRRIRSSLTAFHGRT
GPQPLGD
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggcaaagatccgaaccccgaccggcgacaatacaaacggccatgccgctatcgat
ctcatttccgcactccgcgatcacgccggccagtttccggcgcgggaacaaaaggttgcg
gactacgtgcaaaagcatctgtccgcgatttcggacatgacgatcgccgaactggcaaaa
gcctgcggcgtcagtacaccgaccgtcgttcgcttttgcaggacactcggctgtgacggt
ttccgagaattcaagctgcgacttgcacagaacctggccgtcagcctgcagtatatttcc
gcgccatcgactaccgaacaggttgccagcgaaacggcgatcgaccgcgttctgggcgcg
ctttatgcgaccgccaatgtcatgcggcagcaggtcgatccggccgttatcgagcgggcc
gtcgaaaagatcgccaaatgccggcagcttctcaccgccgggatcggcggtgggtcgacg
atggtggccggtgaagcggcgagccgcttttttcgcctcggtatcccgtctgtcgccctg
cacgacagctaccttctgcagatgcgcgcggcgacgctcgggcccgacgacgttctgctg
tgtgtctccgccagtggcgaagcggatgaactggtcagcgcggccgagattgccggcgga
tatggagccaccacaatcgcgatcgcaccgaaaggctcccgccttgcgatgatttccaag
atccccatcctggtcgatcttcccgaggacccggacatcttcaagcccaccgcctcgcga
tacgcgcacctggtgattgtcgacgccatcgccatgacggtcgcgcaggtccgggccgcc
accacaagcgaaaacctgcgccggatccgctcttccctgaccgccttccatggccgtacc
ggacctcaacctctgggcgattga
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