Labrenzia sp. CP4: ACP90_25430
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Entry
ACP90_25430 CDS
T04295
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lap
Labrenzia sp. CP4
Brite
KEGG Orthology (KO) [BR:
lap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lap03400
]
ACP90_25430
Enzymes [BR:
lap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACP90_25430
DNA repair and recombination proteins [BR:
lap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ACP90_25430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AMN55173
LinkDB
All DBs
Position
complement(5526650..5529796)
Genome browser
AA seq
1048 aa
AA seq
DB search
MARSARLWSVPPSVPFLKTLADTLVDGTLIPGFRPLDDPLLLPSVTLYLPTRRAARLLPE
LFQQRFGGRPVLLPAIRPVGDADEDAQSLTANADLEPLPPAMPLLERHLAMTRLVKAWKG
MLRREALSLRSDEPLGLPASTADAAWLAADLLTLMDEVETEEADWTELSGLVPEDHARYW
QITLDFLQIVREAWPAHLAELKMMDPKARRSALIRREAERLERTPPRGPVIVAGVTGSVP
ATAELLKVVSRLESGVVVLPGLDRYLDSRSWAVLGEKTGKASTRKGLMQKDASTLPSHPQ
YSLKQLLDRLGAGREEVVTLGPNPDRGLLLREELVSEALRPADTSDGWTAYLDARPETDR
AEALDGVSIMTARNEADEALSVAIALREAIERQESAALISPDRMLTRRVAAELARWNIQV
DDSAGRPLDQTAPAILAILAAKLALGGCEPIDLLALLKHPLTRLGLPVKDIRSAARALER
GVVRGPRARPGTAGLQLAVEASREDAGKAHTPRWKKIHDEDWDVIANLVDRLANALKPLE
ELAAEGGTILLTDLARRHVDVIEAISIDHEGSVAELYAGEAGEALAQFLTGLLEASSSGL
EIPAGEWPSVLPALMSGQAVRRRLPGDQRVQILGPMEARLQAFDFAILGGLNEGVWPQRT
RNDPWLNRPMKRDMGLEPPERRLGAAAHDFAQGMGARRVLLSRAARSDGAPTVASRWLQR
LTTLAGPDLTKKLEAQGAVYSALAAQLDRPEGAVRPASRPHPRPPLAARPKSLSITEIER
LIRDPYAIFARHVLELQPVDPIGGEPGAADKGNLIHDALADFLLTWTGAFDDSAVKALTE
IGEELFEPLDAFPAIRALWWPRFQKIAAGFVAYEARRSQHVSQRFLEIGGGVELKLPGFD
FRLRGRADRIDLLSGGGLSVVDYKTGQVPSQKQVDALLSPQLPLEAAMVRRFGFKDVPAD
APISELLYLQLKGGSEPVIEAPRNPKDTPLEDLVEDAWTRLEQLIAHYVREDIGYLSRAR
VMRERQMGGDYDHLARTQEWALGSEEPS
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcagcgcgcgcctctggtctgtcccgccgtccgtccctttcctgaaaacgctg
gccgacacactggtcgacggcaccctgatccctggctttcgcccgctggacgatccactg
ctgctgccgtcggtcacgctgtatctgccgacgcgccgcgctgcgcgcctgctgccggag
cttttccagcagcggtttggtggccggccggttctcctgcctgccatccgcccggtgggc
gatgccgacgaggatgcgcagagcctgaccgccaatgcggatctggaacctctgccgccg
gcaatgccccttctggaacgtcatcttgcgatgacgcggctggtgaaggcctggaaaggc
atgctgcgccgggaagcgctcagtctcaggtccgacgaacctctcggccttccggcgtcg
acggccgatgcagcctggttggcggcagacctgctgacgctgatggacgaggtcgagacg
gaagaagccgactggacggaactgtccggtctggtgccggaggaccatgcccggtactgg
cagatcacgctcgatttcctgcagatcgtgcgggaggcctggcccgcgcatctggccgaa
ctgaaaatgatggacccgaaggcacgccgctcggcccttatccggcgcgaggccgagcgc
ctggaacggacacctcctcgtggcccggtcattgttgcgggtgtcaccggctcggttccg
gccaccgccgaattgctgaaggttgtctcccggcttgaatccggtgtcgtcgtgctgcct
gggctggaccgctatctggacagccgctcctgggccgtattgggagaaaagacgggcaag
gcctctacccgcaaggggctgatgcagaaagacgcgtcaaccctgccttcacatccgcag
tattcgctgaagcagttgcttgatcggctgggtgccgggcgggaagaggtcgtaacactc
gggccaaacccggaccgggggctcctgctgcgtgaggaactggtctccgaggccctgcgt
cccgccgatacctccgatggctggacagcctatctggacgcccgtccagaaacggacagg
gcggaggcattggatggtgtctcgatcatgactgcccgcaacgaggcggatgaagccttg
agcgtggcgattgccttgcgcgaagcgatcgagcggcaggaaagtgcggccctaatttcg
ccggaccgcatgttgacgcgccgggttgcggcagagcttgcccgctggaacatacaggtg
gacgacagtgccggccgcccgctcgaccagaccgcaccggccattctggcgatcctggct
gcgaaactcgcgctcggtggctgcgagcctatcgatcttctggcgcttctgaagcatccg
ctgacacggttgggcctgccggtgaaagacatccggtctgccgcccgcgcgctggagcgt
ggcgtggttcgcggaccgcgcgcccggccgggaacggcaggtttgcaactggctgtcgag
gcgagccgggaagatgcgggcaaggcacatacgccacgctggaaaaagatccacgacgaa
gactgggatgtgattgcgaaccttgtcgaccggctggcgaacgcactgaaaccgctggaa
gaacttgccgcagaaggcggcacgatccttctgaccgacctcgcacggcgtcatgtcgat
gtgatcgaggcgatctcgatcgatcacgaaggttcggtggcagaactttacgccggtgag
gcgggcgaggcgctggcccagttcctgaccggtcttctggaagcaagctccagcggactg
gaaattcccgccggcgaatggccgtcggtactgcccgcgctgatgtccggtcaggccgta
cggcgcaggctgccgggcgaccagcgggtgcagatcctcggtcccatggaagcacggctt
caggcctttgatttcgcgatcctgggtggcctcaatgagggcgtctggcctcaacgcacg
cgcaatgatccgtggctgaaccggccgatgaagcgtgacatggggttggaacccccggaa
cgccggctcggtgcggccgcacatgacttcgcgcaaggcatgggggcacggcgggttctt
ctgtcgcgtgccgcacgctccgacggcgctcccactgttgcatcgcgctggctgcaacgc
ctgaccacgcttgccgggcctgacctgacgaagaaactggaagcgcaaggggcggtatat
tccgcccttgcagcacagctcgaccggccggaaggcgcggtgcggcccgcgtcccggcct
caccctcgtccgcccttggcagcgcgcccgaaatcgctctccatcaccgaaattgaacgc
ttgatccgcgatccctacgcgatctttgcccgtcatgtgctcgagctgcagccggtcgac
ccgatcggcggcgaacccggtgcggccgataagggcaacctcattcacgatgcgctggca
gatttcctgctgacctggaccggcgcattcgacgacagtgccgtaaaggccctgacagag
atcggcgaggagctgtttgagcctcttgatgcgtttccggcgatccgggcgctttggtgg
ccgcgtttccagaaaattgcggctggcttcgttgcctacgaagcgaggcgatcgcaacac
gtcagtcagcggttcctggaaatcgggggcggtgttgaactgaagttgcccggcttcgat
ttccgcctgcgcggccgggcagaccggatcgaccttctaagtggcggtgggctgtccgtg
gtcgattacaagacagggcaggtgccctcgcaaaagcaggtcgatgcgctcctgtcgccg
caattgccgctggaggccgcgatggtccggcggttcgggttcaaggatgtgccggctgac
gcgcccatatccgagctattgtatctgcagctgaagggcggcagcgaaccggtgatcgaa
gcgccgcgaaacccgaaggacacgccgctggaagatctggtggaagacgcctggacgcgg
ctggaacagttgatcgcccactatgtcagagaagacattggttacctgtcccgtgcccgc
gtcatgcgcgagcggcagatgggcggtgactatgatcatcttgccagaacgcaggaatgg
gcacttggatcggaggagccttcatga
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integrated database retrieval system
