Labrenzia sp. CP4: ACP90_26110
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Entry
ACP90_26110 CDS
T04295
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lap
Labrenzia sp. CP4
Brite
KEGG Orthology (KO) [BR:
lap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lap03016
]
ACP90_26110
Enzymes [BR:
lap01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACP90_26110
Transfer RNA biogenesis [BR:
lap03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACP90_26110
Prokaryotic type
ACP90_26110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AMN55280
LinkDB
All DBs
Position
complement(5676881..5677825)
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AA seq
314 aa
AA seq
DB search
MARQKQFKRKKNAINGWLVLDKPYGITSNDALGKIKRIFSPEKVGHAGTLDPRASGLLPV
AFGEATKTVPFVMDGRKVYRFEVTWGVETNTDDTEGEAVATSDVRPNAEEISAVLGEFVG
TIMQVPPKFSAIKVAGERAYDLARDGEEVELEARPIDVHRLDLVECPDENCAVFEAECGK
GTYVRAIARDLGRRLGTCGHVTELRRLLVGPFGEDDLIGLDEILEAAEALEEGAGIEPLV
EEFVLPVREAMDNLIEVPVSLDDAAKIRKGMAVLLRGRDAPLNTEVAFASHASVPVAIGS
IDKGRFQPTRVFHL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcacgccaaaaacaattcaaaagaaaaaagaacgcaatcaacggctggcttgtgctg
gacaagccctatggcatcacctccaacgacgcactcggcaagatcaagcggatcttctcg
ccggaaaaggttggccatgccggaacgcttgatccacgcgcgtccggccttctgccggtt
gccttcggcgaagccacgaaaaccgtccccttcgtcatggatggccgcaaggtctaccgt
ttcgaggtgacctggggcgtggaaaccaacacggacgacaccgagggcgaggcggttgcc
acgtccgacgtgcggccgaatgcggaagaaatttcggcagtccttggcgagtttgtcggc
acgatcatgcaggttccgccgaaattctccgccatcaaggtcgccggtgaacgggcatat
gatctggcgcgcgacggcgaagaggtcgagctggaagcccggcccatcgacgtgcaccgg
ttggatctggtcgaatgtccggacgagaactgcgccgtcttcgaggctgaatgcggcaag
ggcacctatgtgcgggccatcgcccgcgaccttggccgtcgtctcggtacctgtggtcac
gttaccgaactgcgccggttgctggtcgggcccttcggcgaagacgacctgatcgggctg
gacgaaatcctggaagcagccgaggcgcttgaggaaggcgccggcattgagcctctggtc
gaggagttcgtcctgcctgttcgcgaggcgatggacaatctcatcgaggtacccgtttcg
ctcgatgacgcggccaagatccgcaagggcatggcggtgctgctgcgcggccgggatgct
ccgctcaacacggaagtcgcctttgcgagccacgccagtgtgccggttgccatcggctca
attgacaagggccggttccagccgaccagggtgtttcacctgtaa
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