Labrenzia sp. CP4: ACP90_26845
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Entry
ACP90_26845 CDS
T04295
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
lap
Labrenzia sp. CP4
Brite
KEGG Orthology (KO) [BR:
lap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lap03400
]
ACP90_26845
Enzymes [BR:
lap01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
ACP90_26845
DNA repair and recombination proteins [BR:
lap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
ACP90_26845
Prokaryotic type
ACP90_26845
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AMN56310
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Position
5840852..5842408
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AA seq
518 aa
AA seq
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MQIVWFKKDLRIEDNAALKRASLHGPVLPLYVIEPDLWQQPDMAGRHYAFLLECLSELRR
DLAAVGQPLVIRTGEVTEVLGAFLRSNGVAGLWSHEETGNDWTFARDKRVAAWCRAQGIP
WTECRQTGVIRRLQTRDGWAAHWDRFMAEAPVDPPRLSPLAESNPGIDLGKPPAASELGL
PNDYCPNRQRGGRSPAQSTLHSFLFQRGKPYRAAMATPVKAFDACSRLSPYLAFGSLSLR
EVTQATWSRQRDLKGSEFPGRSTWQAAMRSFSGRLHWHCHFMQKLEDEPSLEFRNLHPAY
EGLRPAQPDRERLEAWQKGETGLPFVDACMRALAATGWMNFRMRAMLMAVASYHLWLDWR
APGLHLARLFTDYEPGIHWPQVQMQSGTTGINTIRIYNPVKQGLDQDPEGLFVRRWVPEL
KDIATAHVHEPWKADNAGKVLGKCYPFPVVDYLEAAREARDKVWAVRKGQAFRGAAADIQ
SKHGSRKSGIAMRGQEKARRGRKPRINPDQADLFGPNS
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atccagatcgtctggttcaagaaggacctgaggattgaggacaatgcagcgctcaaacgg
gcaagccttcacggtccggtactgccgctctacgtcatcgaacccgacctgtggcaacag
cccgacatggccggacgccactatgcgtttttgctggaatgcctttccgaattgagacga
gacctggcagcggttggccagccgctggtcatccgcacgggcgaggttaccgaggttctt
ggtgccttcttgcgatcaaacggagttgcagggctctggtcacatgaagagacgggaaac
gactggacgtttgcccgggacaagcgtgttgccgcctggtgcagggctcagggaattccc
tggacggagtgccggcaaaccggcgtaattcgacgccttcaaacacgggatggctgggcc
gcgcattgggaccgcttcatggcagaagcgcctgtcgatccaccccgcttgtcgccactt
gccgaaagcaatcccggtatcgatctcggcaagcctccagcagcatcggaactgggtttg
cccaacgactattgcccgaaccggcagcgcggcgggcggtcccctgcacagtcaactctg
cacagcttcctgtttcagcgcggcaagccttatcgggctgccatggcgacgccggtgaag
gccttcgatgcctgctcccgtctttcgccatatctggcattcggttcgttgtcgctgcgc
gaggtaacccaggcgacctggagccgccagcgtgatctgaagggttcggagtttcccggc
cgcagcacgtggcaggcagccatgcggtccttttcgggccgtcttcactggcactgccat
ttcatgcagaagcttgaagacgaaccctctctggagttccgcaacctgcaccccgcctac
gaggggcttcgaccggcccagcctgaccgagaacggcttgaagcctggcagaaaggggag
acgggcctgccctttgtcgatgcctgcatgcgagcactcgcggccaccggatggatgaat
tttcgaatgcgggcaatgctgatggcagttgccagctatcatctgtggctggactggcga
gcaccgggcctgcatctggcgcggcttttcaccgattatgaacccggcattcactggccg
caggtgcagatgcaatcgggaaccaccgggatcaacaccatccggatctacaatccggtg
aagcagggtctcgatcaggacccggagggtctgtttgttagacggtgggtgccggagctg
aaggacattgcgaccgcgcatgttcacgaaccctggaaggcagataacgcaggcaaggtt
ctgggcaaatgctatcccttcccggtcgtcgattatctcgaggcggcgcgcgaggcgcgg
gacaaggtctgggctgtacggaagggacaagcattccgcggggcagcggcagatatccaa
tcgaaacacggcagccggaaaagcgggattgcaatgcgcggccaggagaaagcccgacgc
ggcaggaaaccgcggatcaatcccgaccaggcagaccttttcgggccaaactcatga
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