Lactobacillus apis: DKL56_00810
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Entry
DKL56_00810 CDS
T06844
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lapi
Lactobacillus apis
Pathway
lapi03420
Nucleotide excision repair
lapi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lapi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DKL56_00810
03430 Mismatch repair
DKL56_00810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lapi03400
]
DKL56_00810
Enzymes [BR:
lapi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DKL56_00810
DNA repair and recombination proteins [BR:
lapi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DKL56_00810
MMR (mismatch excision repair)
Other MMR factors
DKL56_00810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_22
UvrD_C_2
AAA_19
UvrD_C
Catalase_C
AAA_30
Viral_helicase1
DEAD
SLFN-g3_helicase
NACHT
DUF3463
AAA_16
DUF4351
Motif
Other DBs
NCBI-ProteinID:
AWM73151
LinkDB
All DBs
Position
173615..175909
Genome browser
AA seq
764 aa
AA seq
DB search
MLNRVDEKKFEQEHLDHILKMIRAKKAELSSSIKSAEGEAKDLNSHFFDDVKLDYDGYST
SMETALSIHQQQQLLDERENAWQHAARQLTTIQKLEQKPYFARVDFKENGQPAETIYIGL
GSFADKNDHFLIYDWRAPISSIYYDGKLGDVSYVSPEGEITVEMTKKRQFMIEDGKIVNM
FDTNESIGDQMLLEVLGEKSSTQMKSIVTTIQREQNKIIRNTSADLLFVQGAAGSGKTSA
ILQRIAYLLYRYRGNLTSSDVIMFSPNQLFNDYIKNVLPEMGEQNMVQMTYWQFVARRLP
GMNVENLFDQFEDDSADSAISQFKDSTSFFDLLTRYAKHLNQRGVIFKNIYFRDKKRPFF
ENAKINEIYYSYNSNYNLSNRIDATREELIKLLNRKINSEAKKSWVADEIQSLSQEQLNE
LYDRPDQEFESEEKEEKFLSRKIVVKALDKVFQQIKRNNFINMRAQYLSFLRRVPKMTDL
SKWNITEDQWNDHVEEVKASFKNHYIHMNDVSAYLYLYDMITGRHVDYEMRYAFIDEIQD
YTPFQLCYLKYNFPRAKFTMLGDLNQAIFTKDESRSLLKQISGLFDPKKTDVVQLTKSYR
STKQLTDFTKQILRQGEKIESFNRQGPKPVVWGRDDEAEALKVLQEVLMENEQNKLTTAV
ITKDLESAKFVSEKLKKNGVKATLIATANQRLVDGTLIIPSYLAKGLEFDAVIMWDASKK
SYHRLDETQLVYTITSRAMYKLDMIYTGAKSPLLDVDQETYEEK
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatagagtagatgaaaaaaagtttgagcaagagcaccttgatcatatcttaaaa
atgattagagccaaaaaggcggagttatcctcttcaattaagtcggcagaaggagaagct
aaggatcttaactctcacttttttgatgatgtaaaactagactatgacggctattccacc
tcaatggaaacagctttatcaattcatcaacagcagcaacttcttgatgaacgcgagaat
gcatggcaacatgcagctaggcaattaacgacaatccaaaaattagagcaaaagccgtat
tttgcacgagttgattttaaagaaaatggtcagcctgcagaaactatttatattggttta
ggctcctttgctgacaaaaatgatcactttttaatttatgactggcgtgccccaatttct
tcaatttattatgatggcaagcttggcgacgtttcttacgtttctcctgaaggtgaaatt
accgttgagatgaccaagaagcgacaatttatgattgaagacggtaagattgtcaatatg
tttgataccaatgaatcgattggtgatcaaatgttgcttgaggtcttgggtgaaaagtcc
agtacgcaaatgaagtcgattgtgacgacaattcagcgcgagcaaaataagattattcgt
aatacaagcgctgatttattgtttgttcaaggtgctgctgggtcgggaaagacatctgca
attttacaaagaatagcatacttgctctatcggtaccgtggtaatttaacaagtagcgat
gttatcatgtttagccctaaccagctatttaatgactacattaaaaatgttttgcctgag
atgggtgaacagaatatggtgcaaatgacatactggcaatttgttgcacgtcgtttgcct
ggcatgaatgtcgaaaacctgtttgatcagtttgaggatgattctgccgattcagcaatc
agtcaatttaaagattcaactagtttctttgacttgctgactcgctatgcaaaacacctt
aatcaacgtggtgtaatctttaagaacatttatttccgtgacaaaaagcgtccatttttt
gaaaatgcaaaaatcaatgaaatttattattcctacaattcgaactacaatttaagcaac
cgaattgatgcaacgcgtgaagagttaattaaattgcttaaccgcaagattaattctgaa
gctaaaaagtcttgggtagctgatgaaattcagagcctgagtcaagaacaacttaacgag
ctatatgaccggcctgatcaagaatttgaatccgaggaaaaagaagaaaaattcttaagc
cgcaagattgtggttaaggcactggataaagttttccaacaaataaagcgtaataacttt
attaatatgcgtgcgcaataccttagtttcttgcgtcgcgttccgaaaatgactgatctt
tctaaatggaatattactgaagaccagtggaatgaccatgttgaagaagtcaaagctagc
tttaagaaccactatattcatatgaatgatgtctctgcctatctttacttatatgacatg
attactgggcggcacgttgattatgaaatgcgttatgcctttattgatgaaattcaagat
tacacgccatttcaactttgctaccttaaatataattttccacgcgccaagttcacaatg
ctgggagacttaaaccaggctattttcactaaggatgagagtcgaagcttacttaaacaa
attagtggtttgttcgatcctaagaaaactgatgttgttcagctaactaaatcgtaccgt
tcaaccaagcaattaacagattttactaagcaaattttacgtcagggtgaaaaaattgag
tcctttaacaggcaaggaccaaagcctgtcgtttggggacgagatgacgaggctgaggcg
ttaaaagttttgcaagaagtattaatggaaaatgagcaaaacaagttgacaacagcggtg
attactaaagaccttgaaagtgctaagtttgtttcagaaaaattgaagaaaaatggtgta
aaagccactttgattgcaaccgctaatcagcgactggttgatggaacgttgattattccg
tcatatttagctaagggattggaattcgatgcagtcattatgtgggatgcctcaaagaag
agctatcaccgtcttgatgaaacgcaactggtttacacaatcacttcgcgtgcaatgtat
aagcttgatatgatttatacaggtgctaaaagtcctctacttgatgttgatcaagaaact
tacgaagaaaaatag
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