Lactobacillus apis: DKL56_01110
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Entry
DKL56_01110 CDS
T06844
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lapi
Lactobacillus apis
Pathway
lapi03030
DNA replication
lapi03430
Mismatch repair
lapi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lapi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DKL56_01110
03430 Mismatch repair
DKL56_01110
03440 Homologous recombination
DKL56_01110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lapi03032
]
DKL56_01110
03400 DNA repair and recombination proteins [BR:
lapi03400
]
DKL56_01110
Enzymes [BR:
lapi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DKL56_01110
DNA replication proteins [BR:
lapi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DKL56_01110
DNA repair and recombination proteins [BR:
lapi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DKL56_01110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
SusG_C
BRCT
DNApol_Exo
Motif
Other DBs
NCBI-ProteinID:
AWM73207
LinkDB
All DBs
Position
235426..236379
Genome browser
AA seq
317 aa
AA seq
DB search
MSIYVKNGVLHVSGSQDKLRAKGEEKPSFISDYTMLDIETTGLNPYRDHVTELGAVKVRN
NEIVAEFSKLVVYPRSNKVPAFITKLNGITTELLLSEGVPVKEAMTEFREFIGDDIIIGY
NVNFDLNFLYDLTEKFHLPALNNDYVDVLRLARAYYPFQHNRLLDCIQRAGIAEEEQHHG
LADSIDTKKVYDDFRDHFTDELLAEAQGKIKNVDLLEAELEAWELGFRNPISNKLITFAD
GIGMDNDEAALMVNNMGGQAQTIVTPETNYLIIDDDHFFSKNNEAWQKAQEYNKNGSKIK
RLSESYFLNMLDEWARS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgagtatttatgtcaaaaatggcgttttgcacgtctcgggttctcaggataaattgcgt
gcgaaaggtgaagaaaaaccaagctttatttctgattacacaatgcttgatattgaaaca
actggacttaatccctatcgtgaccatgtgactgagctgggtgcggtcaaggtgcgcaat
aacgaaattgttgcagaatttagtaagctagtcgtttatccaagatcaaataaggttcct
gcctttataactaaattaaacgggattactaccgagcttttacttagcgagggtgtgcct
gttaaagaagcgatgactgaatttcgcgaatttattggtgacgacattattattggctat
aacgttaactttgacttgaactttttatatgatttgacggaaaaattccatctgccagca
ttgaataatgattatgttgatgttttgcgacttgcacgtgcgtattatccgttccagcat
aatcgattgctagactgtattcaacgtgctgggattgcagaggaagagcagcatcacggc
ttggctgattcaatcgataccaaaaaggtttacgatgattttcgcgatcattttaccgat
gaacttttggcagaggcgcaaggcaaaatcaaaaacgtagacttacttgaagcagaactt
gaggcctgggaactaggctttcgcaatccgattagtaacaagctaatcacatttgcagat
ggaattggcatggataatgatgaagcagctttaatggttaataacatgggtggccaagcc
caaaccattgttactccggaaaccaattatttgattattgatgatgatcactttttcagt
aaaaacaatgaggcatggcagaaagctcaggaatacaataagaatggtagtaagattaag
cgactatccgaaagctacttcttaaatatgcttgatgaatgggctagatcttaa
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