Lactobacillus apis: DKL56_02170
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Entry
DKL56_02170 CDS
T06844
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lapi
Lactobacillus apis
Pathway
lapi03420
Nucleotide excision repair
lapi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lapi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DKL56_02170 (pcrA)
03430 Mismatch repair
DKL56_02170 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lapi03400
]
DKL56_02170 (pcrA)
Enzymes [BR:
lapi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DKL56_02170 (pcrA)
DNA repair and recombination proteins [BR:
lapi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DKL56_02170 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
DKL56_02170 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_12
YMR265C_C
ResIII
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AWM73375
LinkDB
All DBs
Position
427245..429491
Genome browser
AA seq
748 aa
AA seq
DB search
MSEESILAGLNPQQKEAVKTTEGPLLVVAGAGSGKTSVLTRRIAYLVEEKQVLPWNILAI
TFTNKAASEMREREQKLLGPAANDIWMSTFHALCVRILRRDSDKIGYGRNFSIADSAEQL
TLVKHIEKELNINPKMYEPRGILSAISNAKNDLLTPQAFEDSAASPFEKMAAKVYHEYQK
RLKHDQIMDFDDLIMQTLVLFKKDPEVLHYYQNKFRYMLVDEYQDTNQAQYELCHELAAQ
YKNICVVGDADQSIYGWRGANMENIMNFENDYRDTGVQTVKLEQNYRSTGHILSAANAVI
DNNRNRKKKNLWTDQGDGEKITYYRAQSGDDEAHFIISKIQEEVDDNNRSYKDFAVLYRT
NAQSRTVEEAFVKSNVPYQIVGGHKFYDRKEIMDIMAYLKLVANPNDSMSFNRIINTPKR
GIGRVSVDKFMDVAQGNNLSLIDAFKHINISGISTRAAAKMSDFGAKLRDAIEYAKDHSV
TGLTEKILQDFGYTDALKAEHTIEAETRLENLDEFLSVTKRFDDQYEPEEDDANALSDFL
AEVSLLSDQDDLENNDDQVALMTLHAAKGLEFPVVFLVGMEDGLFPLSRALLEDDQLEEE
RRLAYVGITRAKEKLFLTNAYSRMMFGRMQNNPPSRFLEEIDVEDLDMQNSVPEGVGNSD
FQVQTAPFANVDERARAQVYTPKAKPAGGAIGAEKKGWNVGDQVEHKAWGHGVVTKVNGE
GEDMELDIAFPNKGIKRLLAAFAPIKKV
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaatcgattttggcaggattaaatccgcaacaaaaagaggccgtaaaaacg
acagagggtccactcttggttgtggctggtgcaggctcaggcaaaacctccgtattaaca
agacgaattgcctacttagtagaagaaaaacaagtcttgccttggaatattctggcaatt
acttttaccaataaggcagccagcgaaatgcgcgagcgtgaacagaaactccttggcccc
gccgcaaatgatatttggatgtcaactttccatgctttatgtgtccgtattttacggcgc
gattcagataagataggctatggtcgtaatttctcaattgcggattcagccgaacaatta
actttggttaagcacattgaaaaagaactgaacattaatcctaaaatgtatgaacccaga
ggtatcttgtctgccatttcaaatgctaaaaatgatcttttaacgccacaagcatttgaa
gatagcgctgcatcaccttttgaaaaaatggctgctaaagtctatcacgaataccaaaaa
cggttgaaacatgaccaaattatggattttgatgatttaattatgcagacattggttctc
ttcaaaaaagatcctgaagttttacattattatcaaaataaattccgttatatgctcgtt
gatgagtatcaggatactaaccaagcacaatatgaattatgtcatgaattagcggcacaa
tataagaatatctgtgttgttggtgatgcagatcagtctatttatggctggcgtggcgcc
aatatggaaaacattatgaacttcgaaaatgattaccgcgatactggggttcaaactgtc
aaattagagcagaactatcgctcaactggtcatattttgtccgcagccaacgcagtaatc
gacaataatcgtaatcgcaagaaaaagaacttgtggactgatcagggcgatggcgaaaag
attacttattaccgtgctcaaagtggtgacgatgaagcccactttatcatttccaagatt
caagaagaagttgatgataataaccgctcctacaaagattttgctgttctgtatcggacc
aatgcccagtcaagaacagtcgaagaagcttttgtgaagtcaaatgtcccttatcaaatt
gttggtggtcataagttctacgatcgaaaagaaattatggatatcatggcttatctcaag
ctagttgctaatccaaacgattcaatgagttttaaccgtatcatcaatacgccaaaaagg
ggaattggtcgtgttagtgttgacaagtttatggatgtcgcacaaggaaacaacttgtca
ttgatcgacgcttttaagcacattaatatatcaggcatttcaacccgtgctgcagctaaa
atgagtgactttggtgctaaattacgtgatgcaattgaatatgccaaagatcatagtgtt
acaggtctaaccgaaaagattttgcaggattttggctatacagatgcacttaaggcagaa
catacaattgaagccgaaacaagactagaaaacttggatgaatttctttcagttactaaa
cgttttgacgatcaatatgaacctgaagaagatgatgctaacgctttaagtgacttttta
gcagaagtttcattgttaagtgatcaggatgatttagaaaataatgatgatcaggtcgca
ttaatgaccttgcatgcagctaaaggtttggaattcccagtggtctttttagtagggatg
gaagacggattattcccactttctcgtgcccttttagaagatgatcaattagaagaagaa
cgcagacttgcctatgttggaattactagagccaaagaaaagctctttttgaccaatgct
tattccagaatgatgtttggtcggatgcaaaacaatccaccttcaagattcttggaagaa
attgatgtcgaggatcttgatatgcaaaactcagttccagagggtgtaggaaatagtgat
ttccaagttcaaacagctccttttgctaacgttgatgaacgtgcgcgtgctcaagtttac
acaccaaaggcaaaaccagctggtggtgcaattggtgctgaaaagaagggctggaatgtt
ggcgatcaagttgaacataaagcttggggccacggcgttgtaacgaaagttaacggcgaa
ggcgaagacatggagctcgatattgcgtttccaaataaaggaattaaacgccttctagca
gcatttgctcctattaaaaaggtataa
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