KEGG   Lactobacillus apis: DKL56_02585
Entry
DKL56_02585       CDS       T06844                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
lapi  Lactobacillus apis
Pathway
lapi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lapi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DKL56_02585 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lapi03019]
    DKL56_02585 (rny)
Messenger RNA biogenesis [BR:lapi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DKL56_02585 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KhpA-B_KH KH_2
Other DBs
NCBI-ProteinID: AWM73451
LinkDB
Position
516413..518044
AA seq 543 aa
MTNTILIPVAVAIISILVGTVIGYAVRKNVWEKKVQNAQSDADHILTEAKAQVDAAKAEV
NAQKQAADAIKQSAQNTKKEKILEAQEQIQEYRQKVEDELNTKRDAIARDDNRLKQREDT
LNHKNSLLIEKEDGLTEKENQLVKQKADLDEKIKKADELVQQSQDKLYEVAHLDKEQGKK
MVLSQLSDELVKERAEMIQNSNEEVKAKADHYAHKIIIDAIQNSSADTVAETTVSVVDLP
NEEMKGRIIGREGRNIRSFEALTGVDLIIDDTPKVVTLSGFDAIRREIAKRAMERLIKDG
RIHPARIEEMVDKARKEVNDDIYEAGESALMELGIHKMNPELVKTLGRLKYRTSYGQNVL
GHSIEVAKLAGTMAAELGLNEKLAVRAGLLHDIGKAIDHDIEGSHVEIGVELTRKYHEPD
VVVNAIAAHHGDVPKTSFIAELVVAADTISSARPGARSESLENYIRRLTELEQIANRYDG
VKQAYAIQAGREVRVMVEPDKISDDRITVLARDIRNQVEKELDYPGNIKITVIREKRVVA
VAK
NT seq 1632 nt   +upstreamnt  +downstreamnt
atgacaaatacaatattgattcccgtcgcggttgctattatttcaattttagttggtaca
gtcattggctacgccgttcgaaagaacgtttgggagaaaaaagtccaaaatgcgcaaagt
gatgctgaccatattttaaccgaagcaaaagcacaagtagatgctgcaaaagctgaagtc
aacgcacaaaagcaggcagcagatgctattaagcaaagtgcacaaaataccaaaaaagag
aaaattcttgaagctcaagaacagattcaagaatatcgacaaaaagttgaagatgagcta
aacacaaagcgtgacgcaattgcacgtgatgataatcgcttaaaacaacgagaagataca
ctcaatcacaagaattctttgttgatcgaaaaagaggatggactgaccgaaaaggaaaac
caattagtaaaacaaaaagctgatttagatgaaaaaattaaaaaagctgatgagttagta
cagcaaagccaagataagctctatgaagtagctcatttggataaagaacagggtaaaaag
atggttcttagtcaactatctgatgagctagttaaagaacgtgctgaaatgattcaaaat
agtaatgaggaagttaaggcaaaagctgatcactatgctcataaaatcattattgatgcc
attcagaatagttcagctgatactgtggctgagactacagtatcagttgttgatttacct
aatgaagaaatgaagggacgaattattggtcgtgaaggtagaaatattcgttcttttgaa
gcccttactggtgtcgatttaatcattgatgatactccaaaagtggttacactaagtggt
tttgacgcaattagacgtgaaattgcaaaacgagcaatggaacgcttaattaaggatgga
cggattcatcctgctagaatcgaagaaatggttgataaggctcgtaaagaggtcaacgac
gatatttatgaagctggtgaaagcgccctaatggaattaggaattcacaaaatgaatcct
gaattggttaaaacattaggtcgactcaagtatcggacatcatatggacaaaatgtttta
ggtcactcgattgaagtggcaaaattagccggcacaatggcggctgagctaggtttaaat
gaaaaattagcggttcgcgcgggattattacacgatataggaaaagccatcgatcatgat
attgaaggctcacacgttgaaataggtgtggaattaacaagaaaatatcatgagccagat
gtagtagttaatgcaattgctgctcatcacggggatgtaccgaagacttcgtttattgct
gaactagtagtagcagcagacacgatttcttctgcaagaccaggagcaagaagtgaaagt
ttagaaaactatattagacggttaactgaactagaacaaattgccaatcggtatgacgga
gttaaacaggcttatgccattcaagcaggacgtgaagttcgcgtaatggtagagccagac
aagatctcagatgatcgcatcactgttttagcacgtgatattcgaaaccaagttgaaaaa
gagcttgattacccgggtaatattaagattacggtcattcgtgaaaaaagggtagttgca
gttgcaaaataa

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