Lactobacillus apis: DKL56_02815
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Entry
DKL56_02815 CDS
T06844
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lapi
Lactobacillus apis
Pathway
lapi03030
DNA replication
lapi03430
Mismatch repair
lapi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lapi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DKL56_02815
03430 Mismatch repair
DKL56_02815
03440 Homologous recombination
DKL56_02815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lapi03032
]
DKL56_02815
03400 DNA repair and recombination proteins [BR:
lapi03400
]
DKL56_02815
Enzymes [BR:
lapi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DKL56_02815
DNA replication proteins [BR:
lapi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DKL56_02815
DNA repair and recombination proteins [BR:
lapi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DKL56_02815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AWM73493
LinkDB
All DBs
Position
complement(566590..567123)
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AA seq
177 aa
AA seq
DB search
MNFIAMDFETANRHPESACSLALVMVRDNQIVDRFYTVINPQMPFDARNIQIHDITADDV
KDAPTMAEVWTQIKDLYQPGMLVCAHNARFDTNVMKQSLARYDIQEPHYFVIDTLQTSKL
FEPNLPNHKLDTVSEALNVELWHHHNALSDSEACAGILIAQNKEFGDEPIKNLVYQI
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgaattttattgcaatggactttgaaaccgccaaccgccatccagaaagtgcgtgttct
ctagcactagtaatggttcgcgacaatcaaattgttgaccggttctatacagttataaac
ccccaaatgccgtttgatgcgcgaaacattcaaattcatgacattactgcagatgatgta
aaggatgcgccaacaatggcagaagtttggactcaaatcaaagacttgtatcagcctggc
atgctagtttgtgcgcataatgcacgttttgatacaaatgtaatgaagcaaagtttagcg
cgttacgatattcaagaaccgcactattttgtaatcgacaccctacaaacaagtaaatta
tttgaacctaatctacctaatcataaactggatactgtatccgaagcattaaatgttgaa
ttgtggcaccatcacaatgcgcttagcgatagtgaagcctgtgcaggtattcttatcgcc
caaaacaaagaatttggtgatgaaccaattaaaaaccttgtttaccaaatctaa
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