Lactobacillus apis: DKL56_03555
Help
Entry
DKL56_03555 CDS
T06844
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lapi
Lactobacillus apis
Pathway
lapi03030
DNA replication
lapi03430
Mismatch repair
lapi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lapi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DKL56_03555 (holA)
03430 Mismatch repair
DKL56_03555 (holA)
03440 Homologous recombination
DKL56_03555 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lapi03032
]
DKL56_03555 (holA)
03400 DNA repair and recombination proteins [BR:
lapi03400
]
DKL56_03555 (holA)
Enzymes [BR:
lapi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DKL56_03555 (holA)
DNA replication proteins [BR:
lapi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DKL56_03555 (holA)
DNA repair and recombination proteins [BR:
lapi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DKL56_03555 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HR1
Motif
Other DBs
NCBI-ProteinID:
AWM73628
LinkDB
All DBs
Position
728751..729737
Genome browser
AA seq
328 aa
AA seq
DB search
MTLLSLFKNSNNSNAQTLILGSDSFLNDYIARSCIYEESFQELEKVSVDCESDSLDDLIA
ELTESSLFSQQKIITIKNPFFLTAKVPQKAKKQLDQLQQIFDHVDQLDNKLVIVASYEKL
DRRKKLTKTILKKFNVVDTEVKSYEVKKVTKALISAEGYQITEMALQLLLERSDQVLDTV
LSNFNKLKMAATENKIDETLVRKNVDLSFAQNVFAVLEAALKHNYREAIARLDNQLREGS
NTIQLLAVFENQLELILVAKTLHERGRNETEIVKELGVHPYRVKLALNNKISTNKLASLL
EQAIKLDYNYKNGQYRENNFLKLFVLSV
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgactttactttctttgtttaaaaattcaaataatagcaatgcgcaaaccttaattttg
ggttcagatagctttttgaatgattatattgcgcgctcatgcatatatgaagaatcattt
caagaactagagaaagtatccgttgattgtgaaagcgatagtctagatgatttgattgct
gaattaacagaatcaagtctttttagccagcaaaagataataactatcaaaaatccgttc
tttttaactgctaaagttccgcaaaaagcaaaaaagcaacttgatcagttgcagcaaatt
tttgatcatgttgatcagctcgacaacaaactagtaatagtagcatcgtatgaaaagctt
gatcggcgaaagaagctgacaaaaacaattttgaagaagtttaatgtcgtagatactgaa
gttaaaagttatgaagttaaaaaggtaactaaggcattaattagtgctgaaggatatcag
attacagagatggctttgcagcttttacttgaaagaagcgatcaggttcttgatactgta
ctgagcaattttaataaattaaagatggctgccactgagaataaaattgatgagacacta
gttcgtaaaaacgttgacttatcatttgcccaaaatgtttttgcagttttagaagcagct
ttaaagcataattatcgagaagcgattgcaagattagataaccaattgagagagggtagt
aatacgattcaattacttgcagtctttgaaaaccagttagaattaattttagttgcaaag
acattgcacgagcgcggcagaaatgaaactgaaattgttaaagaactaggggttcacccg
tatcgagtaaagctagctcttaataataaaatttcgactaataaactggcgagcttgtta
gagcaggcaatcaagctagattataactataaaaatgggcaatatcgggaaaacaatttc
ttaaagttatttgttttgagcgtatga
DBGET
integrated database retrieval system
