Lactobacillus apis: DKL56_04430
Help
Entry
DKL56_04430 CDS
T06844
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lapi
Lactobacillus apis
Pathway
lapi03410
Base excision repair
lapi03430
Mismatch repair
lapi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lapi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DKL56_04430 (recJ)
03430 Mismatch repair
DKL56_04430 (recJ)
03440 Homologous recombination
DKL56_04430 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lapi03400
]
DKL56_04430 (recJ)
DNA repair and recombination proteins [BR:
lapi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DKL56_04430 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DKL56_04430 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DKL56_04430 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
ssDNA-exonuc_C
DHHA1
PhoU
Motif
Other DBs
NCBI-ProteinID:
AWM74466
LinkDB
All DBs
Position
complement(911382..913658)
Genome browser
AA seq
758 aa
AA seq
DB search
MDWKQRTGEELAPELVEKYQLGNTEAKLFSLRGINTDEKLNFWFNATEEDLADPSLMHDL
DKAVARINDAIDNGEKITIYGDYDADGITATSIMMETLAILGADVHFFIPNRFRDGYGPN
MAAYEKIVADGTNLIITVDNGITGVEEVAYAKSHGVDTIITDHHKIQEDVPDSYAIVHCN
FPGQDYPFDDYCGAGVAYTICRQLMQDPMPELLELAMIGTIGDMVKVSGEGHIIVKRGLQ
QLNQTERPGLRALIKNSGLNFGQINETDIGFNIAPRLNAVGRLADASLAVELLLSEDEEE
AQEIADQVEKLNDERKELTVEVYQNCLEQIKAKGWQSKGTLVIYNPEFHEGVLGLVANKV
AEQVHKPTIVLTKNDDGIIKGSGRSIAGFNLFNALDPLKKDLFLKFGGHDFACGLSMEES
KIEALRKAFEDSYHGVHEQIVKPYDMELPFEELTIDLIDKIDQVGPFGTENPQPIFCISQ
PQISGCFYMGKEKNHIKVTVTKGNGKLEVVGFNKKYLTKVLLPYIDQMFIQLGKNTYRNQ
VKLQGIMKGMTFAAPKLAIPAPVVDLRQEKYVMGFADRYLLFDKKNKFAAMNNFDLDETK
ITLASEYDEDGEVVVLLDAPHNQNELDFALSNNFEQLYLRFLMDQLPVKNIPDNNAFESV
LRYVYSHPGLSAEDYRQVGPFLNLDYNSILFILRVLFELNFVEMKQGKIVGVKNPAKKPL
IASKYYNGINSQLSFIKQLRQMPSSQLLMYVNKQLKQH
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atagattggaaacagcgcacaggagaagagctagctcctgaactagttgaaaaataccaa
cttggcaatactgaggcaaaattattttctttacgtggtattaacactgatgaaaaactg
aatttttggtttaatgcaacagaagaagacttagcggatcccagcttaatgcacgacttg
gataaagcagttgcaagaatcaatgatgcaattgacaacggagagaaaataacaatctat
ggtgactacgatgctgatggcattactgcaaccagtattatgatggaaacccttgctatc
ttaggtgcagatgttcattttttcattcctaatcgtttccgtgatggttatggtcccaat
atggcagcttatgaaaaaatcgttgcagacggaaccaatttaattattactgtagataat
gggataacaggggttgaagaggtagcttacgctaagtctcacggggtcgatacgattatt
actgaccaccacaaaattcaagaagatgtaccggatagttatgcaattgtgcattgtaat
tttcctggacaagattatccctttgacgactattgtggtgccggtgtagcttatacaatc
tgtcggcaattaatgcaagatccaatgccggaactattagaacttgcaatgattggaaca
attggtgatatggtaaaagtttctggtgaaggtcatatcatcgtaaaaagaggactccag
cagcttaatcagactgagcggcctggattacgtgctttaattaaaaattctggcttaaat
tttggacaaatcaacgaaacagatatcggtttcaatattgctccacgacttaatgcggtt
ggtagactggctgatgcaagcttagctgtagaattattactaagtgaggatgaagaagaa
gcccaagaaattgcagaccaggttgagaagctaaacgatgaacgtaaagaactaacggtc
gaggtttatcaaaattgtttggagcaaatcaaagcaaagggctggcaatccaaagggaca
ctagtaatttataatcctgaattccatgagggcgttttgggccttgttgcaaacaaggtt
gctgagcaggtgcataaaccaacaatcgttttaactaaaaatgatgatggaattattaag
ggatctggacgctctattgcaggtttcaacctatttaatgctctcgatccgcttaaaaag
gatctattcttaaagtttggtggccatgattttgcctgtggtctttctatggaagagagt
aaaattgaggcgctaagaaaggcatttgaagatagctatcatggcgttcatgagcaaatt
gtaaagccatatgatatggaattgccttttgaagaacttacgattgatttaattgataaa
atcgatcaagtcggtccatttggaacggaaaatccgcaacccattttctgcatatctcaa
ccacaaattagtggctgcttttatatgggcaaagagaaaaatcacattaaagtaacggta
actaaaggaaatggaaaacttgaggttgttggctttaacaaaaaatatctgacaaaagtt
ctgttgccgtacattgatcagatgtttattcaactcggcaagaacacttatcgtaatcaa
gttaagctgcaaggcattatgaaagggatgacttttgctgcacctaaactggctattcct
gctccagtagttgatttaaggcaagaaaaatatgtcatgggttttgctgaccgctacctg
ttattcgataagaaaaacaagtttgcagcaatgaataatttcgacctagatgaaaccaaa
attactttagccagtgaatatgatgaagatggagaagtggtcgttttacttgatgctcct
cacaatcagaatgagttagattttgcgcttagcaataactttgagcaactgtacttgcgc
tttttaatggatcagctacctgtaaagaatattccagataataatgcatttgagagtgtt
ttacgctatgtttattcccatcctggactaagtgcagaagattaccgtcaggtagggcca
tttctcaatctagactataatagtattctattcattcttcgggtactttttgaacttaat
ttcgttgaaatgaagcaaggcaaaattgtaggcgttaaaaatccggctaagaaacctctg
attgcttctaaatattataatggaattaactcacagttgagctttattaaacaacttcga
caaatgccaagcagtcaattgctaatgtacgtgaataagcaattaaagcagcattaa
DBGET
integrated database retrieval system
