Lactobacillus apis: DKL56_04465
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Entry
DKL56_04465 CDS
T06844
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lapi
Lactobacillus apis
Brite
KEGG Orthology (KO) [BR:
lapi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lapi03016
]
DKL56_04465
Enzymes [BR:
lapi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DKL56_04465
Transfer RNA biogenesis [BR:
lapi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DKL56_04465
Prokaryotic type
DKL56_04465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AWM73798
LinkDB
All DBs
Position
complement(921627..922520)
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AA seq
297 aa
AA seq
DB search
MINGILVIDKDKGMTSADVVYHLRKALHIRKIGHAGTLDPDVTGVLPIAIGQATKLIELM
HTQNKKYEGTGIIGYATDSYDVSGTVLESEKITAPISKEAIQQAMQSFVGEIEQVPPIYS
AVRVNGKHLYEYARAGIEVERPRRQVQVYQYDIKNDPTFDKEKGEESFDFQIECSKGTYV
RSLVNDLKTELNVPAVMESLRRTASSGFDLSQAVKLDEVINAPEKIADFIQPIDAFFKDY
ESINLNDPQWLKVKNGNAIVLKTNAKKVALRYNNSIKAIYEKDDHMYHPFLMLLQNQ
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgataaacggaattttagtaatcgacaaagataaaggcatgacaagtgctgatgttgtc
tatcatttgcgaaaagcattacatatcagaaaaattggtcatgctggtacactagatcca
gatgtgacaggtgtactgccaattgcaattggccaagctactaagctaattgaattaatg
cacacacagaataaaaagtatgaaggcacaggaattattggttatgcgactgatagttat
gatgtaagtgggacagttttagaaagtgaaaaaatcacagccccaatttcaaaggaagct
atccaacaagcaatgcaaagctttgtgggagaaattgaacaggttccgccaatttattct
gctgttcgcgttaatggtaagcatttatatgaatatgcccgtgctggtattgaagtagag
cgaccaaggcggcaggtgcaagtttatcaatatgatattaaaaatgatccaacctttgat
aaggaaaaaggtgaggaaagttttgactttcagattgaatgtagtaagggcacatatgtc
aggtctctggtcaacgatcttaaaactgaattgaatgttcctgcagttatggaatcattg
agaagaactgctagttcaggttttgatttgagccaagcagttaaattggatgaagtaatt
aatgcaccggaaaagattgccgattttattcaaccaattgatgcctttttcaaggattat
gaaagtatcaacttgaatgatccgcaatggcttaaggtgaaaaatggtaatgcaatagtt
ttgaaaacgaatgcaaaaaaagttgcgttaaggtacaataatagcattaaagcaatatac
gaaaaggatgaccatatgtatcatccgtttttaatgctattacaaaaccaataa
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