Lactobacillus apis: DKL56_05005
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Entry
DKL56_05005 CDS
T06844
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
lapi
Lactobacillus apis
Pathway
lapi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lapi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DKL56_05005
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lapi01007
]
DKL56_05005
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lapi03016
]
DKL56_05005
Enzymes [BR:
lapi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
DKL56_05005
Amino acid related enzymes [BR:
lapi01007
]
Aminoacyl-tRNA synthetase
Class II (U)
DKL56_05005
Transfer RNA biogenesis [BR:
lapi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DKL56_05005
Prokaryotic type
DKL56_05005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
AWM73903
LinkDB
All DBs
Position
complement(1039410..1041827)
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AA seq
805 aa
AA seq
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MLVSYQWLQDFLKLDQEPHQLGEKITRTGVEIAEVKHPEEGLKKIVIGHIIDCEPIEGTH
LNLTHVDVGEEEPHQIVCGAPNVAAGEDVVVALPGARIADNVKIKKGKLRGYESNGMICG
LQEIGFADNLVPEKYADGIFVFPQDADVKPGQDAYEPLGMDDYIFDFDITPNRADTLSME
GAAYEVGAIVDEPVKIENVTLKADGESWTDNFTAEVDPKLAPKFNLRKISGVKVADSPLW
MQKRLWNAGIRPINNVVDVTNYIMLLTGQPMHTYDARAFETNKLVVRKANQGEKLTLLND
KEIDLDENDIVITNGERVVMMAGVMGGLNSEIEDDTTDVILESAIFDPTLIRKAALRHAN
RTEASSRYEKGVNWDATERALDMAALLLRNNASGTIDEGVITATDEKRQPDVIHTTVSYL
NKVLGTEISNDEVGHIFDRLNFEYELDGDNLTVNVPARRWDVSIPADLVEEVGRLYGYDK
IKSTQPVLAETHGGYSETEEAIRRIKAIVQGQGLIEAISYSLTSPEKAVSYTHNPKKLVQ
VQMPLNSSRSTLRQNLMTGLVDAASYNMARKQNQLALFEQGRVYDFENDTYNEHEHLATL
YSGNVYFDNWQHEEEQIDFFYVKGQLTNLFKAIGVNLSKVEYKAEEIEGMHPTRTAGIYI
DGQYVGMIGMISHAVTRASKALNGSEIYGYEIDLDTLVPMIISPKTVSKNAPKFPAIERD
LSILVEESVSNQAIENVINDNGGKFLVNLRVIDVYQGAHIDENKKSLAYRLTFLNEQDTL
TDEVVNKAMASIDAELKEQLGVEIR
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgttagtttcatatcaatggttacaagattttcttaaattagaccaagagccacatcaa
ttaggtgaaaaaatcacccgtactggggttgaaattgctgaagtaaagcatcctgaagaa
ggacttaagaaaatcgttatcggtcacattatcgattgtgagccaatcgaaggcactcac
ttgaacctaactcatgttgatgttggtgaagaagaacctcatcaaatcgtctgtggtgct
ccaaatgttgctgcaggtgaggatgttgttgttgcactgccaggtgcgcgtattgcggat
aacgttaaaattaaaaagggtaagttgcgtggctatgaatccaatggcatgatttgtggc
ttacaagagattggttttgctgataatctcgttccagaaaaatacgctgatggtattttt
gtcttccctcaagatgctgatgtaaaacctggtcaggatgcttacgaacctttaggaatg
gatgactatatttttgattttgatatcacacctaacagggcagatacattatcaatggaa
ggtgctgcttatgaagtgggtgcaatcgttgatgaaccagttaaaattgaaaatgtcact
ttaaaggcagacggtgaatcttggactgataatttcactgccgaagttgaccctaagctc
gcaccaaaatttaatttacgtaaaatcagtggtgtaaaggtggccgatagccctctttgg
atgcaaaagagactttggaatgctggtattagaccgattaataatgtcgttgatgtgaca
aactacatcatgcttttaactggtcaaccaatgcacacttatgacgctcgtgcatttgaa
actaacaagttagtagtaagaaaagcaaatcaaggtgaaaagttaactcttctaaatgac
aaagagattgaccttgatgaaaatgatatcgttattactaatggtgaacgtgttgtcatg
atggccggtgttatgggtggccttaattcagaaattgaggatgacacaaccgatgttatt
ttggaatcagcaatttttgatccaactctaattcgcaaagcagctttacgtcatgctaat
agaactgaagcttcaagtcgttatgaaaaaggtgttaactgggatgctactgagcgtgcg
ctcgacatggcagctttacttcttcgtaacaatgcttctggtacaattgacgaaggtgtg
attactgcgactgatgaaaaacgtcaacctgatgttattcacactactgtttcttattta
aataaagtgctgggaacagaaatttcgaatgatgaagtaggtcatatcttcgatcgactt
aactttgaatacgaacttgatggtgataatctaacagtcaatgtacctgcaagaagatgg
gacgtttctattccagcagatttggttgaggaagttggtcggctttatggttatgacaag
attaaatcaactcaaccagttttagcggaaacacatgggggttattctgaaacagaggaa
gcaattaggagaattaaagcaattgttcaaggtcaaggactaattgaggcaatttcatat
tcactgacttcccctgaaaaggctgtttcatacactcacaatcccaaaaaattagttcaa
gtacaaatgccattaaattcaagtcgttcaactttacgtcaaaacttaatgactggacta
gttgatgcagcaagttataatatggcacgtaaacaaaatcagcttgcactttttgaacag
ggacgagtatatgattttgaaaacgacacatataatgagcacgagcatttagcaacgcta
tattctgggaatgtctattttgataactggcaacatgaagaagaacaaatcgacttcttc
tatgtcaaaggacaattaaccaacttgtttaaagctattggtgttaatttaagtaaagtt
gagtataaagcagaagaaatcgaaggaatgcatccaactagaacagctggtatttatatc
gatggtcaatacgttggaatgattggaatgattagtcatgctgtaaccagagcaagcaag
gcattaaatggcagtgagatttacggctatgaaatcgatcttgatactttagttccaatg
attattagtcctaagactgtttctaaaaatgcacctaagtttcctgcaattgagcgtgac
ctatcaatcttggttgaagaaagtgtctctaatcaagctattgaaaatgtcatcaacgat
aatggtggcaagttcttagttaatttacgtgttattgatgtatatcaaggtgctcatatt
gatgaaaataagaagagtctggcttaccgtcttactttccttaatgaacaagacaccttg
actgacgaagtagttaacaaagcgatggcttcgattgatgcagaactgaaggaacaactt
ggtgttgaaattcggtaa
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