Lactobacillus apis: DKL56_05230
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Entry
DKL56_05230 CDS
T06844
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
lapi
Lactobacillus apis
Brite
KEGG Orthology (KO) [BR:
lapi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lapi03009
]
DKL56_05230
Enzymes [BR:
lapi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
DKL56_05230
Ribosome biogenesis [BR:
lapi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DKL56_05230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
RluD_N
Motif
Other DBs
NCBI-ProteinID:
AWM73947
LinkDB
All DBs
Position
1084128..1085006
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AA seq
292 aa
AA seq
DB search
MSYYFTFNIPTNHEPCSVNDLLRQLLIPRKWRHFLRTEQKIIINGAYRYFNQAVYPNDKV
ELWLDHVETAQNEYAPSDKIPEIIYENPNFIIINKPAGQKTHPNLFETNTALNDCATYLG
FSPFIVHRLDMLTSGLLLVAKNPAVVPILNRELVTKAFHREYLAVVNLEKAIDDSGTIDL
PIGHDPFDQRKRKVVSDGLKSITHYQVLKRYDNNTALVKLTLETGRTHQIRVHLAAIGCP
IIGDPLYNRNDKKDEFLHLTAYQISLQVPFTLDELRVKLPVEKVLLLKKAKN
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagctattactttacatttaacattccaacaaatcatgaaccctgttcagtaaacgac
ttgttacgtcaattactaattccacgcaaatggcgtcattttttgcgtaccgaacaaaag
ataataattaatggtgcttatcggtatttcaatcaagcggtctatcctaacgataaagtc
gaactttggttagaccacgttgaaacagcgcaaaatgaatatgcacctagtgataaaata
ccggaaataatctacgaaaatccaaatttcataataattaacaaaccagctggtcaaaaa
actcatcctaacttgtttgaaactaacactgccctaaatgattgcgccacctatctgggc
ttttctccctttattgtacatcgtttagacatgttgacgagtgggctgctcctcgttgcc
aaaaatccagcagttgtgcctattctaaaccgtgaattagttaccaaggcctttcaccgt
gaatatttagcagttgttaatctagaaaaagcaattgatgatagcggaacaattgaccta
cccattggacatgatccatttgatcaacgtaagcgcaaagtcgttagtgacggactgaaa
tcaatcacacactatcaagttttgaagcgctatgacaacaatacagctttagttaaatta
acattggaaactggacgcacacaccaaattcgcgtccatcttgccgcaattggttgtcca
attataggtgatccactctataaccgaaatgataaaaaagacgagtttctccacttaacc
gcatatcagatttctttacaagtacctttcacattagacgaactgagggtcaaattacct
gtcgaaaaagtgcttttacttaaaaaagcaaaaaactaa
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