Lactobacillus apis: DKL56_05450
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Entry
DKL56_05450 CDS
T06844
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lapi
Lactobacillus apis
Brite
KEGG Orthology (KO) [BR:
lapi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lapi03019
]
DKL56_05450
03009 Ribosome biogenesis [BR:
lapi03009
]
DKL56_05450
Enzymes [BR:
lapi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DKL56_05450
Messenger RNA biogenesis [BR:
lapi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DKL56_05450
Ribosome biogenesis [BR:
lapi03009
]
Prokaryotic type
rRNA helicases
DKL56_05450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UvrD-helicase
Cas3-like_C_2
AAA_19
MGS
GlnE
Motif
Other DBs
NCBI-ProteinID:
AWM73977
LinkDB
All DBs
Position
complement(1129830..1131188)
Genome browser
AA seq
452 aa
AA seq
DB search
MNNIFTNEKIRPELRAGLKKIHFSQPTKVQEEVIPVLLERKNVVVQAVTGSGKTHAFLVP
ILNEIDEKLEYPQAILTAPSRELSEQLYQVARQLRDAAGLYISIAHFAGGSDRERQMKKI
NNRNPQVIIATPGRLHDFVEKKILFLDHVQNFIIDEADMTLDMGFLTDIDFIAKRLPKTV
TFAAFSATIPVKLSNSLRKYMSQPEQIVIDNPAVISPTIKNDLIDIGGKNRKRILYQLLT
MGQPYLALVFANTKQTVDELTKFLQEQGLRVAKIHGGITERERKRTVREINDGQYQYVVA
TDLAARGLDIDGVSLVVNYEIPRDLEFVVHRVGRTGRNGLSGHAVTLIRAEEMNRIAGLE
KMGIHFDFVEIKNDELVPRKHYHSRNERSSDSYTVDNKVNGYVKKAKKKRKPGYKKKIKR
VIQQDKAQKNKIEQRHKIRKAKQQRKRKRDNN
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaataatatttttactaatgaaaaaattagaccagagttgcgtgctggcttaaagaaa
atacactttagtcagccaaccaaagtacaggaagaagttattcctgttttattggagcgc
aaaaatgtcgttgttcaagcagtaactggctcaggaaaaacgcatgcctttttggtacca
attttaaatgaaattgatgaaaaacttgaatatccgcaagcaattttgactgctcctagt
cgagagttatctgaacagctttatcaggttgcccgtcaattgagggatgcggctggtctg
tatatttccattgctcatttcgctggtggtagtgaccgtgagcgtcaaatgaaaaaaatc
aataaccgcaatccgcaagttataattgccacaccaggtcgattacatgattttgttgag
aagaaaattttatttttggatcacgtgcaaaattttatcattgatgaagcagacatgact
ttggatatgggatttttaacggatattgattttattgctaaaaggttacctaagacagtg
acttttgctgctttttcagcaaccattccagtgaagttatctaactctttgcggaaatat
atgtcacaacctgagcaaattgtcatcgataatcctgctgtaatttcacctacaatcaaa
aatgatttgattgatattggtggaaaaaaccgcaaacgtatactgtaccaattattaacc
atgggacagccttatttagcattagtttttgcaaataccaagcaaactgtagatgaattg
actaaatttttgcaggagcagggtttacgtgtcgctaaaattcacggcggtattactgaa
cgtgagcggaaaagaactgttcgcgaaataaatgacggtcaataccaatacgttgttgcg
acagatttagcagcacgtggattggatatagatggcgtaagtcttgtggttaattatgag
ataccacgtgatttagaatttgtggtccaccgtgttggtcgaacaggcagaaacggactt
tcgggtcatgcagtgactcttattcgcgccgaagaaatgaaccgaattgctggactagaa
aaaatgggaattcattttgattttgttgaaattaaaaatgatgagttagtaccacgaaag
cattatcatagtagaaatgaacgcagttcagactcatacactgttgataataaggtcaat
ggctatgttaaaaaagccaaaaagaagcgtaagcctggttataaaaagaaaattaagcgt
gtgatccaacaagataaagcgcaaaaaaataaaattgagcagcgtcataagattcgtaaa
gcaaaacaacagcgtaaacgaaaacgtgataataactaa
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