Lactobacillus apis: DKL56_06020
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Entry
DKL56_06020 CDS
T06844
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lapi
Lactobacillus apis
Pathway
lapi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lapi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DKL56_06020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lapi03021
]
DKL56_06020
03400 DNA repair and recombination proteins [BR:
lapi03400
]
DKL56_06020
Enzymes [BR:
lapi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DKL56_06020
Transcription machinery [BR:
lapi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DKL56_06020
DNA repair and recombination proteins [BR:
lapi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DKL56_06020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
DUF961
Motif
Other DBs
NCBI-ProteinID:
AWM74077
UniProt:
A0A0F4LPE4
LinkDB
All DBs
Position
complement(1269454..1270392)
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPNITVVDQEKSYGKFVIEPLERGFGTTLGNSLRRVLLTSIPGTGLVYVQIDDVL
HEFSTVPGVREDVAKIILNLKKLQLKSFSDEQKTIEVDVEGPATVTADDLKVDSDVQVLN
PEQYICTIAEGGHLHMQIAVKNGRGYVAASENKSEDMPIGVIPVDSLFSPIEKVNYQVES
TRVGKRDDFDKLTLEIWTDGSIKPNDALSFAAKILVAHFKVFETADANTQFNDVMVEKED
DTAEKKLEMTIEELDLSVRSYNCLKRAGINTLQELTDKTEADMMRVRNLGRKSLEEVKNK
LTDLGLSLRQED
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatttgaaaaaccaaatattaccgttgtggaccaagagaagtcttatggtaaa
tttgtcattgaaccactagaacgaggcttcggtactactctaggtaactcattacgtaga
gttttacttacatctattccaggtactggacttgtttatgttcaaattgatgatgtttta
cacgaattctcaaccgttccaggtgttagagaagacgttgctaaaataatcttgaaccta
aagaagcttcaattgaaatcattttctgatgagcaaaagacaattgaagtagacgttgaa
ggtccggctactgttactgcagatgacttaaaagttgattcagatgtgcaggttcttaac
ccagagcaatatatttgtactattgctgaaggtggacacttacacatgcaaattgcagtt
aaaaatggccgtggttacgttgcagcaagtgaaaataagagtgaagatatgccaattggt
gttattccagttgattctctcttttcaccaattgaaaaagttaattatcaagttgaatca
actcgagttggtaaaagagatgattttgacaagctcactttagagatttggactgatggt
tcaatcaaacctaatgacgcccttagttttgctgctaaaattttggtagcacactttaaa
gtgtttgaaactgctgatgcaaatacccaattcaatgacgtgatggttgaaaaagaggac
gacactgcagagaagaagcttgaaatgacaattgaagagcttgatttatctgttcgttca
tacaactgcctgaagcgtgctggcattaatactctgcaagaactgactgataagacagaa
gcagatatgatgcgtgtacgtaatttgggtcgcaagtcattagaagaagttaaaaacaaa
ttaactgatttgggactttcacttcgtcaagaagattaa
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