Lysobacter antibioticus ATCC 29479: GLA29479_1277
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Entry
GLA29479_1277 CDS
T04526
Symbol
top1E
Name
(GenBank) putative DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
laq
Lysobacter antibioticus ATCC 29479
Brite
KEGG Orthology (KO) [BR:
laq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
laq03032
]
GLA29479_1277 (top1E)
03400 DNA repair and recombination proteins [BR:
laq03400
]
GLA29479_1277 (top1E)
Enzymes [BR:
laq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GLA29479_1277 (top1E)
DNA replication proteins [BR:
laq03032
]
Prokaryotic type
DNA Topoisomerases
GLA29479_1277 (top1E)
DNA repair and recombination proteins [BR:
laq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GLA29479_1277 (top1E)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF7508
Motif
Other DBs
NCBI-ProteinID:
ALN62161
LinkDB
All DBs
Position
complement(1358459..1359523)
Genome browser
AA seq
354 aa
AA seq
DB search
MSERAPSAAVNRRAARAAGLRYVNDGEPGILRRRAGRGFAYRDARGHAVQAAKTLERIRA
LAIPPAYTEVWICADARGHIQATGRDARGRKQYRYHPQWRQRRDEGKFERVVDFGRALPA
LRRCVRRDLKLPGFPRDKVLAIVVAVMAETLLRIGNHEYARSNRSFGLTTLRNRHVEFLR
DGRARFRFRGKSGLAQEVELDNARLTRLVRRCQQLPGQALFQYRDDDGRLQPIDSGAVND
YLQRAMGADFSAKDFRTWGGTLAAFRRLAALPLPEPARGGAPSERALASAQNAVIGEVAQ
ALRNTPSVCRKAYIDPAVFVGWREGRLARYADGARGELEWERAALRFLKQARRS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcgagcgccttcggctgcggtcaatcgccgcgccgcgcgcgcggccggcttg
cgttacgtcaacgacggcgagcccggcatcctgcgccggcgtgccgggcgcggcttcgcc
tatcgcgatgcgcgcggccacgcggtgcaggcagcgaagaccctcgaacgcatccgcgca
ctggcgattccgccggcctataccgaggtctggatctgcgccgacgcgcgcggccacatc
caggcgaccggccgcgatgcgcgcgggcgcaagcaataccgttatcacccgcaatggcgg
cagcgccgcgacgagggtaagttcgagcgcgtggtcgacttcgggcgcgcgttgccggcg
ttgcgccgctgtgtgcgtcgtgacctgaagctgccgggcttcccgcgcgacaaggtgttg
gcgatcgtggtggcggtgatggccgagaccctgctgcggatcggcaatcacgagtacgcg
cgcagcaaccgctcgttcggcctgaccaccttgcgcaaccgccacgtcgaattcctgcgc
gacggccgcgcgcgctttcgctttcgcggcaagagcgggctggcgcaggaggtcgaactc
gacaacgccaggctgacccggctggtgcggcgttgccagcaattgccggggcaggcgctg
ttccagtatcgcgacgacgacggccgcctgcagccgatcgattccggcgcggtcaacgat
tatctgcagcgcgcgatgggcgccgacttcagcgccaaggatttccgcacctggggcggc
accctggccgcgttccggcgcctggccgcattgcccttgcccgagcccgcgcgcggcggc
gcgccgagcgaacgcgccctggcctcggcgcagaacgcggtgatcggcgaagtcgcgcag
gccttgcgcaacaccccgtcggtttgccgtaaggcctacatcgacccggccgtgttcgtg
ggctggcgcgaaggccggttggcgcgttacgccgacggcgcccgcggcgaactggaatgg
gagcgcgcggcgctgcgattcctcaagcaggcgcggcggagctag
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