Lysobacter antibioticus ATCC 29479: GLA29479_1509
Help
Entry
GLA29479_1509 CDS
T04526
Symbol
apxIB
Name
(GenBank) toxin RTX-I translocation ATP-binding protein
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
laq
Lysobacter antibioticus ATCC 29479
Pathway
laq02010
ABC transporters
laq03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
laq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GLA29479_1509 (apxIB)
03070 Bacterial secretion system
GLA29479_1509 (apxIB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
laq02000
]
GLA29479_1509 (apxIB)
02044 Secretion system [BR:
laq02044
]
GLA29479_1509 (apxIB)
Transporters [BR:
laq02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
GLA29479_1509 (apxIB)
Secretion system [BR:
laq02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
GLA29479_1509 (apxIB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_16
AAA_22
DUF87
SbcC_Walker_B
HUTI_composite_bact
AAA_18
AAA_21
MeaB
NB-ARC
PRK
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ALN62388
LinkDB
All DBs
Position
complement(1605809..1607398)
Genome browser
AA seq
529 aa
AA seq
DB search
MDKVLVHHGLTTLHVIAVGLVSIAVFDVVLSGLRTYVFAHTTSKIDVELGARLFRHILAL
PLAYFESRRVGDTMARVRELENIRTFLTGQALTSVLDLFFTVVFLAVMFYYSGWLTLIVV
ISLPVYALWSASITPVLRKRLNEKFARSADNQSFLVETVTGIGTIKATAVDPRVTRTWDN
QLAGYVGAAFRVTRLATIGQQGVQLVQKLVSIAILFWGAQLVIAGDLSIGQLIAFNMLAG
QVAAPIIRLAQLWQDFQQVGISVERLGDILNTRTELPGSRMVLPPIRGQVTFEGVTFRYR
PDAAEVLSGIDFNIAAGEVIGIVGRSGSGKSTLTKLVQRLYVPERGRVLIDGHDLALADP
AWLRRQLGVVLQENFLFNRSVRENIALSDPGIPLERVIHAAKLAGAHDFIVELPEGYDTK
VGEQGAGLSGGQRQRIAIARALITDPRILIFDEATSALDYESEHAVMANMRAICKGRTVL
IIAHRLSTVRQANRIVVVEKGRIVESGSHAELLERPDGHYAYLHRLQQG
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggtgttggtgcaccacggcctcacgacgctgcatgtgatcgcggtcgggctg
gtatcgatcgcggtattcgacgtggtcttgtcgggtttgcgtacctatgtgttcgcgcac
acgaccagcaagatcgatgtcgagctgggcgcgcgcctgttccggcacatcctggccttg
ccgctggcgtacttcgagtcgcgccgcgtcggcgacaccatggcgcgtgtgcgcgaactc
gagaacatccgcaccttccttaccggacaggcgctgacctcggtactcgatctgttcttt
accgtggtgtttctcgcggtgatgttctactacagcggctggctcaccctgatcgtggtg
atctcgctgccggtctacgccctgtggtccgcgtcgatcacgcccgtgctgcgcaaacgg
ttgaacgagaagttcgcccgcagcgccgacaatcagtcgttcctggtcgagacggtgacc
ggcatcggcaccatcaaggccaccgcggtcgacccccgggtcacccgcacctgggacaac
cagctcgcgggctacgtcggtgccgcgttccgcgttacccggttggcgacgatcggccag
caaggcgtgcagttggtgcagaagctggtcagcatcgcgatcctgttctggggagcccag
ttggtgatcgcaggggacctgtcgatcgggcagctgatcgcgttcaatatgctcgccggg
caagtcgccgcgccgatcatccggctggcgcagctgtggcaggacttccagcaggtcggc
atttccgtcgagcgcctgggcgacattctcaatacccgcaccgagctgccgggtagccgc
atggtcctgccgccgatccgcggccaggtgactttcgagggcgtgaccttccgctatcgg
cccgacgcggccgaggtactcagcggcatcgatttcaacatcgccgcgggcgaggtgatc
ggcatcgtgggccggtcgggttccggcaagagtacgctgaccaagctggttcagcgcctg
tacgtgcccgagcgcggccgggttctgatcgacggtcacgatcttgccctggccgatcca
gcgtggctgcggcgtcagctgggcgtggtgctgcaggagaatttcctgttcaaccgcagc
gtgcgcgagaacatcgccttgtcggatccgggtattccgctggagcgggtcatccacgcc
gccaaactggccggcgcgcacgacttcatcgtcgagctgcccgaaggctacgacaccaag
gtcggcgagcaaggtgcgggcttgtcgggagggcaacgtcaacgcatcgcgatcgcgcga
gccctgatcaccgatccgcgcatcctgatcttcgatgaggccaccagcgcgctcgactac
gaatccgaacacgcggtgatggccaacatgcgggcgatctgcaaagggcgcacggtattg
atcattgcccaccgtctctcaaccgtgcgccaggccaatcgcatcgtcgtcgtcgagaag
gggcggatagtcgaaagcggctcgcacgccgagctgctcgaacgtccggacggtcattac
gcgtatctgcatcgtctgcagcagggatga
DBGET
integrated database retrieval system
