Lysobacter antibioticus ATCC 29479: GLA29479_1525
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Entry
GLA29479_1525 CDS
T04526
Symbol
uvrA
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
laq
Lysobacter antibioticus ATCC 29479
Pathway
laq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
laq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GLA29479_1525 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
laq03400
]
GLA29479_1525 (uvrA)
DNA repair and recombination proteins [BR:
laq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GLA29479_1525 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GLA29479_1525 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
AAA_29
SMC_N
AAA_23
AAA_16
AAA_21
RsgA_GTPase
nSTAND1
AAA_25
DnaJ_CXXCXGXG
nSTAND3
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ALN62403
LinkDB
All DBs
Position
1626333..1629254
Genome browser
AA seq
973 aa
AA seq
DB search
MALDYIRIRGARTHNLKNIDLDLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLSVMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGAP
RCPDHHYPLEAQTVSQMVDQALALDPEQRYMLLAPVIRERKGEHAQVFEQLRAQGFVRVR
VDGELYEIDAVPPLALRVKHTIEAVVDRFRPRDDIKQRLAESFETALKLGDGMAQVYSLD
KADAAPLLFSSKYSCPVCDYSLPELEPRLFSFNSPVGACPTCDGLGVAEFFDPGRVVVHP
ELSLSAGAVRGWDRRNAYYFQLIQSLAKHYKFNVDAPWQSLSATVQKAVLYGSGDELISF
TYLTENGGRSQRKHRFEGIVPNLERRYRETESAAVREELAKYISQRPCPDCAGARLNRAA
RNVFVAERPLPELVVLPVDEALQFFKALELPGWRGEIAVKIVKEIVDRLRFLVDVGLDYL
TLERKADSLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLTRLRDLG
NTVIVVEHDEDAIRLADYIVDIGPGAGVHGGEVVAQGQFADVLKAPRSLTGQYLSGKRRI
EIPKNRHKPNPKAMLHLRGATGNNLKDVDLDIPSGLLTCVTGVSGSGKSTLINDTLYVLA
ANELNGASQTPAPYRSIENMELFDKVVDIDQSPIGRTPRSNPATYTGLFTPLRELFAQVP
EARARGYSPGRFSFNVRGGRCEACQGDGLIKVEMHFLPDVYVPCDVCHGKRYNRETLEVL
YKGYNINDVLSMTVEAALNLFEAVPTIARKLETLMDVGLSYIKLGQSATTLSGGEAQRVK
LSKELSRRDTGRTLYILDEPTTGLHFHDIEHLLVVLHRLRDDGNTVVVIEHNLDVIKTAD
WVIDLGPEGGHRGGTILATGTPEQIAALPHSHTGHFLAPLLGTPKADAAKKKPAAKKSAP
AATASRAKKKSAA
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggactacatccgcatccgcggcgcgcggacgcacaacctcaagaacatcgat
ctcgatctgccgcgcgacaagctgatcgtgatcaccggcttgtccggttccggtaaatcc
tccctggccttcgacacgatctacgccgaaggccagcgacgctacgtcgaatcactgtcg
gcctatgcccgacagttcctgtcggtgatggaaaagcccgatgtcgaccacatcgaaggc
ctgtcgccggcgatctcgatcgagcagaaatccacctcgcacaacccgcgctcgaccgtt
ggcacgatcaccgaggtctacgactacctgcgtctgctgtacgcacgcgtgggcgcgccg
cgttgccccgatcatcactacccgctcgaagcccagaccgtcagccagatggtcgaccag
gcgctggcgctggaccccgagcagcgctacatgctgctggccccggtgatccgcgagcgc
aagggcgagcacgcccaggtgttcgagcaactgcgcgcgcagggcttcgtgcgcgtgcgc
gtcgacggcgagctgtacgagatcgacgcggtgccgccgctggcgctgcgggtcaagcac
accatcgaagcggtggtcgaccgcttccgcccgcgcgacgacatcaagcagcgcctggcc
gagtcgttcgagaccgcgctcaagctcggcgacggcatggcccaggtgtattcgctggac
aaggccgacgccgcgccgctgctgttctcctcgaagtacagctgcccggtctgcgattac
tcgctgcccgagctggaaccgcggctgttctcgttcaactcgccggtcggcgcctgcccg
acctgcgacggcctcggcgtcgccgagttcttcgatccgggccgcgtggtcgtgcatccg
gagctgtcgctctcggccggcgcggtgcgcggctgggaccgccgcaacgcctattacttc
cagttgatccagtcgctggccaagcactacaaattcaacgtcgatgcgccctggcagtcg
ctgtcggcgacggtgcagaaggcggtgctgtacggcagcggcgatgagctgatcagcttc
acctacctcaccgagaacggcggccgcagccagcgcaagcatcgcttcgaaggcatcgtg
ccgaacctggagcgccgctaccgcgaaaccgagtcggcggcagtgcgcgaggaactggcc
aagtacatcagccaacgtccctgccccgactgcgccggtgcgcgcctcaaccgcgccgcg
cgcaacgtgttcgtcgccgaacgcccgctgccggaactggtggtgttgccggtcgacgag
gcgctgcaattcttcaaggccctggaactgccgggctggcgcggcgagatcgcggtcaag
atcgtcaaggagatcgtcgaccgcctgcgcttcctggtcgacgtcggcctggattacctg
accctggaacgcaaggccgattcgctctccggcggcgaggcccagcgcatccgcctggcc
agccagatcggcgccggcctggtcggcgtgatgtacgtgctcgacgaaccctcgatcggc
ctgcaccagcgcgacaacgagcgcctgctcggcaccctgacccggctgcgcgatctcggc
aacaccgtgatcgtggtcgaacacgacgaagacgcgatccgcctggccgactacatcgtc
gacatcggccctggcgccggcgtgcacggcggcgaagtcgtggcccagggccagttcgcc
gacgtgctgaaggcgccgcgttcgctgaccggccaatacctcagcggcaagcgccggatc
gagatccccaagaaccggcacaagccgaatccgaaggcgatgctgcatctgcgcggcgcc
accggcaacaacctcaaggacgtcgacctcgacatcccctcgggcctgttgacctgcgtc
accggcgtgtccggttcgggcaagtcgaccctgatcaacgacaccttgtacgtgctcgcc
gccaacgaactcaacggcgcctcgcagacgccggcgccgtaccgctcgatcgagaacatg
gagttgttcgacaaagtcgtcgacatcgaccagtcgccgatcggccgcacgccgcgttcg
aacccggccacctacaccggcctgttcacgccgctgcgcgagctgttcgcgcaggtgccg
gaagcgcgcgcacgcggctattcgccgggccgcttcagcttcaacgtgcgcggcggacgc
tgcgaggcctgccagggcgacggcctgatcaaggtcgagatgcacttcctgcccgacgtc
tacgtgccctgcgacgtctgccacggcaagcgctacaaccgcgagaccctggaagtcctg
tacaagggctacaacatcaacgacgtgctgtcgatgacggtcgaggcggcgttgaacctg
ttcgaggcggtgccgaccatcgcgcgcaaacttgaaacgctgatggacgtcggcctgagc
tacatcaagctcggccagagcgcgaccaccttgtcgggcggcgaagcacagcgcgtcaag
ctgtcgaaggagctgtcgcggcgcgacaccggccgcaccctgtacatcctcgacgagccg
accaccggcctgcacttccacgacatcgagcatctgctggtggtcctgcaccgcctgcgc
gacgacggcaataccgtggtggtgatcgaacacaacctcgacgtgatcaagaccgcggac
tgggtcatcgacctgggaccggaaggcggccatcgcggcggcaccatcctcgccaccggc
acgccggagcagatcgccgcgctgccgcattcgcataccggccacttcctcgccccgctg
ctcggcacgccgaaggcggacgcggcgaagaagaagccggcggcgaaaaaatccgccccc
gctgcgaccgcgtcgcgcgccaagaagaaatccgctgcatga
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