Lysobacter antibioticus ATCC 29479: GLA29479_1835
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Entry
GLA29479_1835 CDS
T04526
Symbol
rpfC
Name
(GenBank) sensory/regulatory protein rpfC
KO
K10715
two-component system, sensor histidine kinase RpfC [EC:
2.7.13.3
]
Organism
laq
Lysobacter antibioticus ATCC 29479
Pathway
laq02020
Two-component system
laq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
laq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GLA29479_1835 (rpfC)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GLA29479_1835 (rpfC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
laq01001
]
GLA29479_1835 (rpfC)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
laq02022
]
GLA29479_1835 (rpfC)
Enzymes [BR:
laq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
GLA29479_1835 (rpfC)
Protein kinases [BR:
laq01001
]
Histidine kinases
Other
GLA29479_1835 (rpfC)
Two-component system [BR:
laq02022
]
Other families
RpfC-RpfG (cell-to-cell signaling)
GLA29479_1835 (rpfC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
HisKA
Hpt
DUF7966
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
ALN62709
LinkDB
All DBs
Position
2004913..2007081
Genome browser
AA seq
722 aa
AA seq
DB search
MASILSVVKERLSNRPDSEHGQALVRLVIACLIVAYLLGLQAFDRASVATQTMLWVMSAE
SLVGLGLMAAIVRQPGASHLRRWIGMIADYSTLAMLMSLDAPALAPLYVIVLWVTIGNGL
RYGTTYLYTAASLAGASFLAVILKNDYWRGQPYLSAGLWLGLVAIPAYLSSLLRNLQKAT
EDARRANEAKSRFLANMSHELRTPLNGIIGMAELMHGTRLAPDQREYADVIHASAQSLLL
LVNDVLDISAIEAGKLQRRDIDFNLQEVMKRLQKMLQPLAAAKGLTLKVDVEQDVPVRLN
GDSALLTQVLLNLLHNAIKFTEKGGVSLVTRLVGGATGPGTPGVERQVRLRFSVRDTGIG
VPSEDVDRIFQAFEQVDNGPTRRFGGTGLGTTIAKTLTQLLGGEIGLEANPGGGSHFWVE
LPLRLEEAALTQPDAQQEGSGKVISFEDPFLRHKTRVRSLRVLIADDQSANRTVLTRILE
RAGHRVQAANDGEQALDQLELGQFDLAVLDMHMPGLSGLDVIRQLRFMQAGNGRRTPTII
LSADATLQASEAASEAGAMAFLTKPIVVGRLLETIADVVDSQRMPAVRAISDVSRPLTNP
AVLAELAEMGLGDQFLRDFVEQCLKDAQSCQTDLEAAAAVARWDELREIAHAYKGVSENL
GAHSIAERCSQVMRASDDVLVRECPKLVVDLATQLSAVADVSRQEVARLSRGNRGKDVPD
VS
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggcttccatcctgagcgtggtcaaggagcgcctttcgaaccgcccggacagcgagcac
gggcaggctctggtgcggctggtcatcgcctgcctgatcgtcgcttatctgctgggcctg
caggccttcgaccgggccagcgtggccacccagaccatgctgtgggtgatgtcggccgag
tccctggtcggcctgggcctgatggcggcgatcgtgcgccagcccggagcctcgcacctg
cgccgctggatcggcatgatcgccgactattcgaccctggcgatgctgatgtcgctggac
gcgcccgcgctggcgccgctgtacgtgatcgtgctgtgggtgaccatcggcaacggcctg
cgctacggcaccacctacctgtacaccgccgcgtccctggccggcgcctcgttcctggcg
gtgatcctcaagaacgactattggcgcggccagccctatctgtcggccggcctgtggctg
ggcctggtggcgatcccggcctacctgtcctcgttgctgcgcaacctgcagaaggcaacc
gaggacgcccgccgcgccaacgaggccaagagccggttcctggccaatatgagccacgag
ctgcgcacgccgctcaacggcatcatcggcatggccgagctgatgcacggcacgcgcctg
gcgccggaccagcgcgagtacgccgacgtcattcacgcctcggcgcagtcgctgctgttg
ttggtcaacgacgtgctcgacatttcggcgatcgaggccggcaagctgcagcgccgcgac
atcgatttcaacctgcaggaagtgatgaagcggctgcagaagatgctgcaaccgctggcc
gcggcgaaggggctgacgctcaaggtcgatgtcgagcaggacgtcccggtgcgcctcaac
ggcgacagcgcgctgctgacccaggtgctgttgaacctgctgcacaacgcgatcaagttc
accgagaagggcggggtgtcgctggtcactcggctggtcggcggcgccaccggtcccggc
acgcccggggtcgagcgccaggtgcgcttgcgcttctcggtacgcgacaccggcatcggc
gtgccgagcgaggacgtcgatcgcatcttccaggccttcgagcaggtcgacaacggcccg
acccgccgtttcggcggcaccggcctgggcaccacgatcgccaagaccctgacccaactg
ctcggcggcgagatcggcctggaagccaaccccggcggcggcagtcatttctgggtcgag
ctgccgctgcgcctggaagaggccgccctgacccagcccgatgcgcagcaggaaggcagc
ggcaaggtcatctcgttcgaggacccgttcctgcgccacaagacccgggtgcgcagcctg
cgggtgctgatcgccgacgaccagtcggccaaccgcaccgtgctgacccgcatcctggag
cgcgccggtcaccgcgtgcaggccgccaacgacggcgaacaggccctggaccagctcgaa
ctcggccagttcgatctggccgtgctcgacatgcacatgcccggcctcagcggcctggac
gtgatccggcagctgcgtttcatgcaggccggcaacggccgccgcacgccgaccatcatc
ctcagcgccgatgcgaccctgcaggcctccgaagcggccagcgaagccggagcgatggcg
ttcttgaccaagccgatcgtggtcgggcgcctgctcgaaaccatcgccgacgtggtcgat
tcgcagcgcatgccggcggtgcgcgcgatcagcgacgtcagccgtccgttgaccaacccg
gcggtgttggccgaactggccgaaatgggtttgggcgatcagttcctgcgcgatttcgtc
gagcagtgtttgaaagacgcgcagtcctgccagaccgacctggaggccgcggcggcggtg
gcgcgttgggacgagttgcgcgagatcgcacacgcctataagggcgtgtcggaaaatctc
ggcgcgcactcgattgcggagcgctgctcgcaggtcatgcgcgcaagcgacgacgtactc
gttcgcgaatgtccgaaactggtcgtggacctcgctacgcaattgtcggcggtagccgac
gtcagccgtcaggaagtggcgcgcctcagtcgcggcaaccgcggcaaggacgtccccgac
gtttcttga
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