Lysobacter antibioticus ATCC 29479: GLA29479_1888
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Entry
GLA29479_1888 CDS
T04526
Name
(GenBank) ku protein
KO
K10979
DNA end-binding protein Ku
Organism
laq
Lysobacter antibioticus ATCC 29479
Pathway
laq03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
laq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
GLA29479_1888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
laq03400
]
GLA29479_1888
DNA repair and recombination proteins [BR:
laq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
GLA29479_1888
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
ALN62762
UniProt:
A0A0S2DVQ0
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All DBs
Position
2062707..2063597
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AA seq
296 aa
AA seq
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MARPIWTGTLSFGLLNIPVKLMTGERRVDLHFRMLDSRNKAPIRYERVNEETGEEVPWKE
IVKAFEYDKGSYVVIEEADIAAAAPDHKETVDIDTFVDAASIGAEFYEKPYVLEPGKKAE
KGYVLLREVLKRTGMVGVGRVVIRTREYLAAVVPQDDALMLMILRYAQELVDPSDYKLPE
GGMAKWKISAREVEMAEQLIKSMSGEWKPDSYKDDFRQRLHKVIEQRVKSKKVVRGKPSD
ETKLPENAATNVIDFAELLKRSLEKKGGQGAGKRAAKKAPAKKTAKAAKKRTRKSA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcccgatctggaccggaaccctgtcgttcggattgctcaacatcccggtcaaa
ctgatgaccggcgagcgccgcgtcgacctgcatttccgcatgctggacagccgcaacaaa
gcgccgatccgttacgagcgggtcaatgaagagaccggcgaagaagtgccgtggaaggaa
atcgtcaaggccttcgagtacgacaagggcagttacgtggtgatcgaggaggccgatatc
gccgcggccgcgccggaccacaaggaaaccgtcgatatcgataccttcgtcgacgccgct
tcgatcggcgccgagttctacgagaagccctatgtgctcgaacccggcaagaaagccgag
aaaggctacgtcctgctgcgcgaggtgctcaagcgcaccggcatggtcggcgtgggccgg
gtggtgatccgcacccgcgaatacctggcggcggtggtgccgcaggacgacgccctgatg
ctgatgatcctgcgctacgcccaggaattggtcgaccccagcgattacaagctgcccgag
ggcggcatggcgaagtggaagatatccgcgcgcgaggtcgagatggccgagcagttgatc
aagtcgatgagcggcgaatggaagccggacagctacaaggacgacttccgccaacgcctg
cacaaggtcatcgagcagcgggttaagtcgaagaaggtcgtgcgcggcaagcccagcgac
gaaaccaagctgccggaaaacgccgcgaccaacgtcatcgacttcgccgaactgctcaag
cgcagcctggagaagaagggcgggcagggtgcgggcaagcgcgcggccaagaaagccccg
gccaagaagaccgcgaaggcggccaagaagcgcacgcgcaagtcggcgtga
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