Lysobacter antibioticus ATCC 29479: GLA29479_2004
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Entry
GLA29479_2004 CDS
T04526
Name
(GenBank) response regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
laq
Lysobacter antibioticus ATCC 29479
Pathway
laq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
laq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GLA29479_2004
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
laq02022
]
GLA29479_2004
02035 Bacterial motility proteins [BR:
laq02035
]
GLA29479_2004
Two-component system [BR:
laq02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
GLA29479_2004
Bacterial motility proteins [BR:
laq02035
]
Pilus system
Twitching motility proteins
GLA29479_2004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_50
AAA_5
AAA_16
Mg_chelatase
Pre_tape_measure
Motif
Other DBs
NCBI-ProteinID:
ALN62876
UniProt:
A0A0S2DWT0
LinkDB
All DBs
Position
2194661..2196067
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AA seq
468 aa
AA seq
DB search
MAETRSALVVDDERDIRELLVMTLGRMGLRCDTASGLGEARSQLLRNRYDLCLTDMRLPD
GSGMDLVAEISQKYPNTPVAMITAFGNVEAAVDALKAGAFDFVAKPVDLAVLRDLVRHAL
ELNDTRRSASEAVGSRLYGESPAMIKLRQTIGKVARSQAPVYIAGESGVGKELVARTIHS
EGGRADGPFVPVNCGAIPAELMESEFFGHKKGSFTGAHVDKPGLFQAADGGTLFLDEVAE
LPLPMQVKLLRAIQEKSIRPVGAQAELVVDVRILSATHKDLAALVAEGRFRQDLYYRINV
IELRVPPLRERLDDLPGLAAKILHRLAGSQGRPVPRLGEDAQEALRAYGFPGNVRELENI
LERALALAEGEVLNASDLRLPRLATQAPLNELQNAGAAPQQAAGAVDPRTLNPRDTATSA
LPSYIEEIERAAIQQALQENRYNKTRTAAALGITFRALRYKLKKLGID
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaactcgtagtgcattggtggtcgatgacgagcgcgatattcgcgagctcctc
gtcatgaccttgggccgcatgggcctgcgttgcgacaccgcatcgggcctcggcgaggcg
cgcagccaactgctgcgcaatcgttacgacctgtgcctgaccgacatgcgcctgcccgac
ggctcgggcatggacctggtcgccgagatcagccagaaataccccaataccccggtcgcg
atgatcaccgccttcggcaacgtcgaagccgcggtcgacgcgctcaaggccggcgccttc
gatttcgtcgccaagccggtcgacctggcggtgctgcgcgatctcgtgcgccacgcgctc
gaactcaacgacacccgccgcagcgccagcgaggcggtcggctcgcgcctgtacggcgaa
tcgccggcgatgatcaagctgcgccagaccatcggcaaggtcgcccgcagccaggccccg
gtgtatatcgccggcgagtccggcgtcggcaaggaactggtcgcgcgcaccatccattcc
gaaggcggccgcgccgacggcccgttcgtgccggtcaactgcggcgcgattccggccgag
ctgatggagagcgagttcttcggccacaagaagggcagcttcaccggcgcccacgtcgac
aagcccggcctgttccaggccgccgacggcggcaccttgttcctggacgaagtcgccgag
ctgccgctgccgatgcaggtcaagctgctgcgcgcgatccaggaaaaatccattcgtccg
gtcggcgcccaggccgagctcgtcgtcgacgtgcgcattctgtcggcgacccacaaggac
ctcgccgcgctggtcgccgaaggccgcttccgccaggacttgtactaccgcatcaacgtc
atcgagctgcgcgtgccgccgttgcgcgaacgcctcgacgacctgcccggcctggccgcg
aagatcctgcaccgcctcgccggcagccagggccgtccggtgccgcgcctcggcgaggac
gcccaggaggcgctgcgcgcctacggcttcccgggcaacgtgcgcgagctcgagaacatt
ctcgaacgcgcgctcgcattggccgaaggcgaagtcctcaacgccagcgacctgcgcctg
ccgcgcctggccacccaggcccctttgaacgaactgcagaacgcaggcgcagcgccgcag
caagcggccggcgccgtcgacccgcgcaccctcaacccgcgcgacaccgcgaccagcgcc
ctgccttcttatatagaagagatcgagcgcgccgcgatccagcaggccctgcaggaaaac
cgctacaacaagacccgcactgcggccgcactcggcatcaccttccgcgcgctgcgctac
aagctcaagaagctcgggatcgactga
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