Lysobacter antibioticus ATCC 29479: GLA29479_2222
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Entry
GLA29479_2222 CDS
T04526
Symbol
groL
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
laq
Lysobacter antibioticus ATCC 29479
Pathway
laq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
laq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLA29479_2222 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
laq03019
]
GLA29479_2222 (groL)
03110 Chaperones and folding catalysts [BR:
laq03110
]
GLA29479_2222 (groL)
03029 Mitochondrial biogenesis [BR:
laq03029
]
GLA29479_2222 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
laq04147
]
GLA29479_2222 (groL)
Enzymes [BR:
laq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
GLA29479_2222 (groL)
Messenger RNA biogenesis [BR:
laq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GLA29479_2222 (groL)
Chaperones and folding catalysts [BR:
laq03110
]
Heat shock proteins
HSP60 / Chaperonin
GLA29479_2222 (groL)
Mitochondrial biogenesis [BR:
laq03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
GLA29479_2222 (groL)
Exosome [BR:
laq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GLA29479_2222 (groL)
Exosomal proteins of other body fluids (saliva and urine)
GLA29479_2222 (groL)
Exosomal proteins of breast cancer cells
GLA29479_2222 (groL)
Exosomal proteins of colorectal cancer cells
GLA29479_2222 (groL)
Exosomal proteins of bladder cancer cells
GLA29479_2222 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ALN63092
LinkDB
All DBs
Position
complement(2425001..2426641)
Genome browser
AA seq
546 aa
AA seq
DB search
MSAKEIRFGEDARAKMVRGVNILANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEI
ELSDKFENMGAQMVKEVASKTSDNAGDGTTTATVLAQALIREGMKAVAAGMNPMDLKRGI
DKAVIEAVAELKKLSKPSSTSKEIAQVGAISANSDADIGDLIAQAMDKVGKEGVITVEDG
SGLENELDVVEGMQFDRGYLSPYFINNQQSMSAELDDPFVLLYDKKISNVRDLLPVLEGV
AKAGKPLLIVAEEVEGEALATLVVNTIRGIVKVCAVKAPGFGDRRKAMLEDMAVLTGGTV
ISEEVGLQLEKATIKDLGRAKKVQVSKENTTIIDGAGDGDSIQARIKQIKAQIEETSSDY
DREKLQERVAKLAGGVAVIKVGASTEIEMKEKKARVEDALHATRAAVEEGIVPGGGVALL
RAKAAISGLKGANEDQNHGIQIALRAMEAPLREIVTNAGEEPSVILNKVQEGKGAFGYNA
ANGEYGDMLEFGILDPTKVTRTALQNAASIAGLMITTEAMVAELPKKDEPAMPGGGGMGG
MGGMDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctaaagaaattcgtttcggtgaggacgcgcgcgccaagatggtgcgcggcgtc
aacattctcgccaatgccgtgaaggccaccctcggcccgaagggccgtaacgtcgtgctc
gagaagagcttcggcgcgccgacgatcaccaaggacggcgtgtccgtcgccaaggaaatc
gagctgtccgacaagttcgagaacatgggcgcgcagatggtcaaggaagtcgcttccaag
acctccgacaacgccggcgacggcaccaccaccgcgaccgtgctggcccaggcgctgatc
cgcgaaggcatgaaggccgttgccgccggcatgaacccgatggacctcaagcgcggcatc
gacaaggccgtgatcgaggccgtggccgagctgaagaagctctccaagccgtcctcgacc
agcaaggaaatcgcccaggtcggcgcgatctccgccaactccgacgccgacatcggcgac
ctcatcgcccaggcgatggacaaggtcggcaaggaaggcgtgatcaccgtcgaagacggt
tcgggccttgagaacgaactcgacgtcgtcgagggcatgcagttcgaccgcggctacctg
tcgccgtacttcatcaacaaccagcagtcgatgtcggccgagctcgacgacccgttcgtg
ctgctgtacgacaagaagatctccaacgtccgcgacctgctgccggtgctggaaggcgtc
gccaaggccggtaagccgctgctgatcgtcgccgaggaagtcgaaggcgaagcgctggcg
accctggtggtcaacaccatccgcggcatcgtcaaggtctgcgccgtcaaggcgccgggc
ttcggcgaccgtcgcaaggcgatgctggaagacatggccgtgctgaccggcggcaccgtg
atctccgaggaagtcggcctgcagctcgaaaaggccacgatcaaggatctcggccgcgcg
aagaaggtgcaggtctccaaggagaacaccaccatcatcgacggcgccggcgacggcgat
tcgatccaggcccgcatcaagcagatcaaggcgcagatcgaagagacctcttcggactac
gaccgcgagaagctgcaggagcgcgtggccaagctggccggcggcgtggcggtgatcaag
gtcggcgcatcgaccgagatcgagatgaaggaaaagaaggctcgcgtcgaagacgcgctg
cacgctacccgcgctgccgtggaagaaggcatcgtcccgggcggcggcgtcgcgctgctg
cgcgccaaggctgcgatctcgggcctgaagggcgccaacgaagaccagaaccacggcatc
cagatcgccctgcgcgcgatggaagccccgctgcgcgaaatcgtcaccaacgccggcgaa
gagccgtcggtcatcctgaacaaggtccaggaaggcaagggcgcgttcggttacaacgcc
gccaacggcgaatacggcgacatgctcgagttcggcatcctggacccgaccaaggtcacc
cgcaccgcgctgcagaacgccgcgtcgatcgccggtctgatgatcacgaccgaagcgatg
gtcgccgagctgccgaagaaggacgagccggcgatgccgggcggcggtggtatgggcggc
atgggcggcatggatttctga
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