Lysobacter antibioticus ATCC 29479: GLA29479_2609
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Entry
GLA29479_2609 CDS
T04526
Name
(GenBank) bacterial pre-peptidase C-terminal domain protein
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
laq
Lysobacter antibioticus ATCC 29479
Brite
KEGG Orthology (KO) [BR:
laq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
laq01002
]
GLA29479_2609
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
laq02042
]
GLA29479_2609
Enzymes [BR:
laq01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
GLA29479_2609
Peptidases and inhibitors [BR:
laq01002
]
Metallo peptidases
Family M9
GLA29479_2609
Bacterial toxins [BR:
laq02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
GLA29479_2609
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M9
Peptidase_M9_N
PPC
Peptidase_M61
Motif
Other DBs
NCBI-ProteinID:
ALN63475
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All DBs
Position
2841463..2843673
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AA seq
736 aa
AA seq
DB search
MSEAMFGGAHVQSLPLEPAMVPPSRDPQAYRVKIGEEQKAIEEFDRKRPSQKAQAKRAGG
EPSALHGAAGSSPQQGAAGHAGCAFGDAVGADLLDKLKHADTACANSQFNLSRDDALRTF
TNEKMVTVADEIARLAQTYDGDNDQDILQLILFVRAGYYNQFKYRDQGLGAFNAAVGQSV
RAGLDAFFGNNVTMALENDAHGEILAEAVILIDSARENTRFLSKIRTLLVNYDAAYDNLS
FMERAINNCFHVLFNQGVELPDFTSQVAATLADTLSGFIRSNIGKLGGAKEYLVLNAARE
LSRQMRYPATIKNYASTKVDELADLTAFNNSTAPLRTIFGQYVETYDRENCQKYGLCNYK
EELRAAVLPIQHACSPTISIRAQSISGDELRRTCDSVAGEQTYFHRVLATGNQAVANDNN
ASLEMVIFDSSSDYGRYSSAIYGNDSNNGGIYLEGNPAVVGNQPRFIAYEAEWIRPTFQI
WNLEHEFVHYLDGRYNLYGDFMAGFSQGTVWWTEGLAEYISWSYLNQDNARAREQAARKP
WTLSQLFKNEYGDQSRVYQGGYLAVRYMFEKRANDVNTILSYLRPGNYAEYKNRIAAIGT
SYDADFNNWLTCVADGTACQQAPECTAPDTRQLDRNCARSNISQTRGNHAHFYILVPAGT
ASMRVTATGGNGNADLFVNTLGGSDPWAYKTRHNYWSMNAGNEESIVVNNPPGGQYVYIS
LYGEQDFSGVRLTVTY
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcgatgttcggcggcgcccatgttcagtctctgccgctggaaccggccatg
gtgccgccgagtcgcgacccgcaagcctatcgggtcaagatcggcgaggaacaaaaagcg
atagaagagttcgatcgcaagcgtccgtctcagaaagcgcaggcgaagcgtgcaggcgga
gagcccagtgcgctgcacggcgccgcgggaagcagcccgcagcagggggccgccggacac
gcaggctgcgcattcggcgatgcggtcggcgcagatctgctggacaagctgaagcatgcc
gatacggcctgcgcgaattcccagttcaatctctccagggacgacgcgctgcgcaccttc
accaacgagaagatggtcaccgtcgccgacgaaatcgcccggctcgcccagacctacgat
ggcgacaacgaccaggacatcctgcagttgatcctcttcgtgcgagccggatattacaac
cagttcaagtatcgggatcagggccttggggcgttcaatgcggcggtcggccagtccgtg
cgcgccgggcttgatgcgttcttcggcaacaacgtgaccatggctttagagaacgatgcg
cacggcgaaatcctcgcggaagccgtgatcctgatcgactccgctcgcgagaacacccgg
tttctttccaagatccgtaccttgctcgtcaactacgacgctgcttacgacaatctgtcc
ttcatggagcgggcgatcaacaactgcttccacgtcctgttcaaccagggggtcgagctg
cccgattttacgagtcaggtcgccgccactctggccgatactctctcgggcttcatccgc
agcaatatcggcaagctcggcggcgcaaaagagtatcttgtactcaacgcggcgcgcgag
ctctcccgccagatgcgctatccggcaaccatcaagaactatgccagtaccaaagtcgac
gaactggcggacctgacggcattcaacaactcgaccgcgccgctgcgtacgatcttcggg
cagtacgtcgaaacctacgatcgcgaaaactgccagaaatacggtctgtgtaattacaag
gaggagctgcgtgcggccgtcctgccgatccaacatgcctgcagcccgaccatcagcatt
cgcgcgcagagcatctcgggcgacgagcttcgcaggacctgcgattccgtcgccggcgag
cagacctacttccaccgagtcctggccaccggcaaccaggcggtcgcaaacgacaacaac
gcctcgttggaaatggtaatcttcgatagttcgtccgactacggcagatactccagcgcg
atctacggcaatgattccaacaacggcggcatctatctcgagggcaatcccgcggtagtc
ggcaatcagccccgcttcatcgcctacgaggccgaatggatccgtccgacgttccagatc
tggaacctggaacacgagttcgtgcattacctcgacgggcgctacaacctgtacggcgac
ttcatggcgggcttcagccaaggcaccgtttggtggacggaaggactggcggagtacatt
tcgtggtcctacttgaatcaggacaacgcccgggctcgcgaacaagccgcgcgcaaaccc
tggacgctgagtcagttgttcaagaacgaatacggtgatcagtcgcgggtctatcaaggc
gggtacttggccgtacgctacatgttcgagaagcgtgccaacgatgtgaacacgatcctg
tcctacctgcggccagggaactacgccgagtataagaatcgcatcgcggccatcggtacg
agctacgacgcggatttcaacaactggctgacctgcgttgccgacggtacggcctgccag
caggctccggagtgcaccgcgccggacacgcgtcagctcgacagaaactgcgcccgcagc
aacatctcgcaaacgcgcggcaatcacgctcacttctacatcctggttccggccggaacc
gccagcatgcgggtcaccgcaaccggcggaaacggcaacgccgacctgttcgtcaatacc
ttgggcggctctgatccgtgggcctacaagacccgccacaactactggtcgatgaatgcc
ggtaacgaagagtcgatcgtggtgaacaacccgccgggtgggcagtacgtctacatcagc
ctctatggagagcaggacttcagcggtgtgcgtttgactgttacctattga
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